| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g29335 | 1:31,872,138-31,873,792 | + | C2H1g10234 | CX1g003679 | LOC_Os01g62010 | Os01g0837200 | - | Detail |
| C1H1g10810 | 1:31,875,534-31,879,239 | + | C2H1g23741 | CX1g003883 | LOC_Os01g62020 | Os01g0837300 | OsUXS4 | Detail |
| C1H1g12894 | 1:31,880,496-31,885,845 | + | C2H1g07218 | CX1g001070 | LOC_Os01g62040 | Os01g0837500 | - | Detail |
| C1H1g00961 | 1:31,891,635-31,892,414 | + | C2H1g26587 | CX1g002011 | LOC_Os01g62060 | Os01g0837600 | DGP1 | Detail |
| C1H1g17576 | 1:31,896,488-31,896,748 | - | - | CX1g005449 | - | Os01g0837700 | - | Detail |
| C1H1g29125 | 1:31,897,160-31,901,682 | - | C2H1g28819 | CX1g002419 | LOC_Os01g62070 | Os01g0837800 | - | Detail |
| C1H1g06942 | 1:31,905,964-31,909,673 | - | C2H1g16663 | CX1g006172 | LOC_Os01g62080 | Os01g0837900 | - | Detail |
| C1H1g02866 | 1:31,913,861-31,914,142 | - | - | CX1g005503 | LOC_Os01g62110 | Os01g0838200 | - | Detail |
| C1H1g31822 | 1:31,917,634-31,918,939 | - | - | - | - | Os01g0838350 | - | Detail |
| C1H1g06334 | 1:31,921,791-31,922,438 | - | C2H5g00940 | CX1g002459 | LOC_Os01g62130 | Os01g0838600 | - | Detail |
| C1H1g29226 | 1:31,928,732-31,932,201 | + | C2H1g02384 | CX1g002865 | LOC_Os05g38610 | Os01g0838800 | - | Detail |
| C1H1g17733 | 1:31,932,734-31,935,801 | - | C2H1g20151 | CX1g005211 | LOC_Os01g62160 | Os01g0838900 | - | Detail |
| C1H1g09133 | 1:31,958,484-31,959,032 | + | C2H5g12287 | CX1g002459 | LOC_Os01g62190 | Os01g0839100 | ZFP179 | Detail |
| C1H1g26731 | 1:31,959,909-31,960,129 | - | C2H1g08125 | CX1g003395 | LOC_Os01g62200 | Os01g0839200 | OsDSR2 | Detail |
| C1H1g10232 | 1:31,960,858-31,962,212 | - | C2H1g16708 | CX1g003395 | LOC_Os01g62200 | Os01g0839200 | OsDSR2 | Detail |
| C1H1g15957 | 1:31,964,741-31,966,881 | + | C2H1g22109 | CX1g004020 | LOC_Os01g62210 | Os01g0839300 | - | Detail |
| C1H1g05756 | 1:31,968,329-31,969,699 | + | C2H1g29778 | CX1g004020 | LOC_Os01g62220 | Os01g0839400 | - | Detail |
| C1H1g25854 | 1:31,970,603-31,971,022 | - | C2H1g27325 | CX1g002747 | LOC_Os01g62230 | Os01g0839500 | - | Detail |
| C1H1g17963 | 1:31,973,996-31,977,554 | - | C2H1g11723 | CX1g000448 | LOC_Os01g62244 | Os01g0839700 | - | Detail |
| C1H1g24415 | 1:31,983,398-31,984,141 | - | C2H1g28281 | - | LOC_Os01g62260 | Os01g0839900 | OsOLP1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025627 | 3:2,799,801-2,800,274 | - | C1H3g26257 | C2H3g24140 | LOC_Os03g06390 | Os03g0159900 | - | Detail |
| CX3g029121 | 3:2,802,398-2,802,556 | + | - | - | - | - | - | Detail |
| CX3g025658 | 3:2,804,691-2,810,998 | + | C1H3g14921 | C2H3g08821 | LOC_Os03g06410 | Os03g0160100 | ACDR1, SPL3, OsEDR1, OsACDR1, EDR1 | Detail |
| CX3g028864 | 3:2,812,778-2,813,338 | + | C1H10g04845 | - | LOC_Os03g06420 | Os03g0160200 | - | Detail |
| CX3g027015 | 3:2,815,906-2,816,199 | - | C1H3g16143 | C2H3g01208 | LOC_Os03g06430 | Os03g0160300 | - | Detail |
| CX3g030159 | 3:2,819,263-2,822,440 | - | C1H3g24862 | C2H3g27894 | LOC_Os03g06440 | Os03g0160400 | OsDNA2_8 | Detail |
| CX3g027024 | 3:2,832,276-2,835,320 | - | C1H3g27076 | C2H3g10921 | LOC_Os03g06460 | Os03g0160600 | - | Detail |
| CX3g031001 | 3:2,843,435-2,844,043 | - | C1H3g12946 | C2H3g17145 | LOC_Os03g06480 | Os03g0160900 | - | Detail |
| CX3g025715 | 3:2,854,108-2,857,197 | + | C1H3g27407 | C2H3g23882 | - | - | - | Detail |
| CX3g027922 | 3:2,862,127-2,870,160 | + | C1H3g11682 | C2H3g05410 | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| CX3g029615 | 3:2,871,187-2,876,200 | - | C1H3g12948 | C2H3g11481 | LOC_Os03g06520 | Os03g0161200 | - | Detail |
| CX3g030950 | 3:2,881,702-2,881,875 | - | - | - | - | - | - | Detail |
| CX3g031150 | 3:2,888,115-2,890,003 | + | C1H3g19950 | C2H3g04338 | LOC_Os03g06570 | Os03g0161400 | - | Detail |
| CX3g029485 | 3:2,897,946-2,900,238 | + | C1H3g16884 | C2H3g04897 | LOC_Os03g06580 | Os03g0161500 | - | Detail |
| CX3g025939 | 3:2,905,375-2,905,524 | + | - | - | - | - | - | Detail |
| CX3g029738 | 3:2,905,701-2,906,162 | - | C1H3g31680 | C2H3g20671 | LOC_Os03g06610 | Os03g0161600 | OsEPFL6 | Detail |
| CX3g026348 | 3:2,910,519-2,910,761 | - | - | - | - | - | - | Detail |
| CX3g031187 | 3:2,914,365-2,914,532 | + | - | - | - | - | - | Detail |
| CX3g029835 | 3:2,921,953-2,924,128 | + | C1H3g19723 | C2H3g16543 | LOC_Os03g06620 | Os03g0161800 | - | Detail |
| CX3g029527 | 3:2,925,685-2,927,899 | + | C1H3g17239 | C2H3g18983 | LOC_Os03g06630 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |