| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27777 | 1:26,903,577-26,904,881 | + | C2H1g14542 | CX1g000877 | LOC_Os01g52380 | Os01g0721800 | - | Detail |
| C1H1g16429 | 1:26,907,034-26,909,887 | - | C2H1g03938 | CX1g001695 | LOC_Os01g52390 | Os01g0721900 | - | Detail |
| C1H1g19540 | 1:26,913,451-26,917,004 | + | C2H1g29212 | CX1g005554 | LOC_Os01g52400 | Os01g0722100 | - | Detail |
| C1H1g14417 | 1:26,925,623-26,927,295 | + | C2H1g15644 | CX1g004391 | LOC_Os01g52410 | Os01g0722300 | Os2R_MYB14 | Detail |
| C1H1g17552 | 1:26,938,467-26,942,242 | + | C2H1g14945 | CX1g002677 | LOC_Os01g52450 | Os01g0722700 | OsHXK9 | Detail |
| C1H1g17968 | 1:26,946,286-26,949,083 | - | C2H1g16107 | CX1g001570 | LOC_Os01g52470 | Os01g0723000 | - | Detail |
| C1H1g22223 | 1:26,951,203-26,952,076 | + | C2H1g09375 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C1H1g00329 | 1:26,952,184-26,952,905 | + | C2H1g00796 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C1H1g27397 | 1:26,953,685-26,955,175 | - | C2H1g00282 | CX1g004240 | LOC_Os01g52490 | Os01g0723200 | - | Detail |
| C1H1g18013 | 1:26,962,480-26,968,150 | + | C2H1g25823 | CX1g001850 | LOC_Os01g52500 | Os01g0723400 | NADP-ME2, Os-NADP-ME2, Os-NADP-ME2-2 | Detail |
| C1H1g17264 | 1:26,969,834-26,975,477 | + | C2H1g08871 | CX1g003519 | LOC_Os01g52514 | Os01g0723500 | - | Detail |
| C1H1g03740 | 1:26,976,986-26,981,316 | + | C2H1g17638 | CX1g004209 | LOC_Os01g52530 | Os01g0723600 | - | Detail |
| C1H1g09315 | 1:26,983,980-26,987,890 | + | C2H1g22241 | CX1g004680 | LOC_Os01g52540 | Os01g0723700 | - | Detail |
| C1H1g17060 | 1:26,988,103-26,994,535 | - | C2H1g23039 | CX1g004575 | LOC_Os01g52550 | Os01g0723800 | - | Detail |
| C1H1g18463 | 1:27,012,831-27,022,129 | + | C2H1g05862 | CX1g004747 | LOC_Os01g52560 | Os01g0724500 | - | Detail |
| C1H1g09116 | 1:27,038,700-27,046,564 | + | C2H1g26023 | CX1g002347 | LOC_Os01g52610 | Os01g0725400 | - | Detail |
| C1H1g01881 | 1:27,047,370-27,050,594 | + | C2H1g19762 | CX1g003740 | LOC_Os01g52630 | Os01g0725600 | - | Detail |
| C1H1g28016 | 1:27,055,008-27,060,104 | + | C2H1g12468 | CX1g000922 | LOC_Os01g52640 | Os01g0725800 | - | Detail |
| C1H1g01009 | 1:27,060,442-27,061,041 | - | C2H1g25269 | CX1g004829 | LOC_Os01g52650 | Os01g0725900 | - | Detail |
| C1H1g26602 | 1:27,063,887-27,064,616 | - | C2H1g28455 | CX1g001737 | LOC_Os01g52660 | Os01g0726100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027145 | 3:2,691,630-2,692,264 | - | C1H3g15562 | C2H3g20735 | LOC_Os03g06080 | Os03g0156600 | OsHIPP41 | Detail |
| CX3g030214 | 3:2,693,249-2,695,984 | - | C1H3g17245 | C2H3g12120 | LOC_Os03g06090 | Os03g0156700 | OsZNL | Detail |
| CX3g027334 | 3:2,703,848-2,707,980 | + | C1H3g00011 | C2H3g09177 | LOC_Os03g06120 | Os03g0157300 | - | Detail |
| CX3g029328 | 3:2,709,054-2,714,390 | - | C1H3g18475 | C2H3g13704 | LOC_Os03g06139 | Os03g0157400 | - | Detail |
| CX3g029562 | 3:2,720,859-2,724,055 | + | C1H3g26244 | C2H3g27336 | LOC_Os03g06160 | Os03g0157500 | - | Detail |
| CX3g026857 | 3:2,724,773-2,725,665 | - | C1H3g25701 | C2H3g20862 | LOC_Os03g06170 | Os03g0157600 | - | Detail |
| CX3g027580 | 3:2,727,125-2,730,939 | + | C1H3g13607 | C2H3g07970 | LOC_Os03g06180 | Os03g0157700 | - | Detail |
| CX3g029139 | 3:2,733,453-2,738,532 | + | C1H3g27937 | C2H3g02320 | LOC_Os03g06190 | Os03g0157800 | - | Detail |
| CX3g030066 | 3:2,739,908-2,741,182 | + | C1H3g17311 | C2H3g08121 | LOC_Os03g06200 | Os03g0157900 | - | Detail |
| CX3g027012 | 3:2,743,509-2,747,438 | + | C1H3g14244 | C2H3g26855 | LOC_Os03g06220 | Os03g0158200 | - | Detail |
| CX3g025660 | 3:2,748,093-2,750,288 | - | C1H3g30148 | C2H3g29839 | LOC_Os03g06230 | Os03g0158300 | - | Detail |
| CX3g029728 | 3:2,752,447-2,755,980 | - | C1H3g19490 | C2H3g19059 | LOC_Os03g06240 | Os03g0158500 | - | Detail |
| CX3g028543 | 3:2,757,902-2,758,267 | + | - | - | LOC_Os03g06250 | Os03g0158600 | - | Detail |
| CX3g030115 | 3:2,761,183-2,765,272 | - | C1H3g08402 | C2H3g18282 | LOC_Os03g06290 | Os03g0158700 | - | Detail |
| CX3g028779 | 3:2,765,756-2,767,258 | + | C1H3g27159 | C2H3g21729 | LOC_Os03g13230 | Os03g0158900 | - | Detail |
| CX3g026196 | 3:2,774,515-2,777,172 | + | C1H3g19166 | C2H3g05214 | LOC_Os03g06330 | Os03g0159100 | - | Detail |
| CX3g029258 | 3:2,778,323-2,784,350 | + | C1H3g00562 | C2H3g05736 | LOC_Os03g06340 | Os03g0159200 | - | Detail |
| CX3g031270 | 3:2,787,245-2,787,922 | - | C1H3g03543 | C2H3g02146 | LOC_Os03g06350 | Os03g0159400 | - | Detail |
| CX3g027894 | 3:2,792,589-2,793,592 | - | C1H3g19003 | C2H3g07500 | LOC_Os03g06360 | Os03g0159600 | - | Detail |
| CX3g031117 | 3:2,794,197-2,795,817 | + | C1H3g22077 | C2H3g25960 | LOC_Os03g06370 | Os03g0159700 | OsNBL3 | Detail |