| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g25319 | 5:19,156,751-19,158,788 | + | C1H5g20773 | CX5g038806 | LOC_Os05g38800 | Os05g0463400 | - | Detail |
| C2H5g01133 | 5:19,161,477-19,166,795 | + | C1H5g12108 | CX5g039882 | LOC_Os05g38810 | Os05g0463500 | - | Detail |
| C2H5g16713 | 5:19,168,094-19,171,222 | - | C1H5g15206 | CX5g040078 | LOC_Os05g38820 | Os05g0463800 | HAP3B, OsHAP3B, OsNF-YB-3, NFYB3 | Detail |
| C2H5g05069 | 5:19,173,660-19,179,975 | - | C1H5g26692 | CX5g038352 | LOC_Os05g38830 | Os05g0463900 | - | Detail |
| C2H5g10683 | 5:19,184,512-19,192,346 | + | C1H5g04043 | CX5g038856 | LOC_Os05g38850 | Os05g0464100 | - | Detail |
| C2H5g06217 | 5:19,194,622-19,194,965 | - | C1H5g03107 | - | - | - | - | Detail |
| C2H5g23544 | 5:19,195,352-19,195,600 | - | C1H5g03378 | - | LOC_Os05g38860 | Os05g0464200 | - | Detail |
| C2H5g00642 | 5:19,199,886-19,206,233 | - | C1H5g03501 | CX5g040041 | LOC_Os05g38930 | Os05g0464300 | - | Detail |
| C2H5g07866 | 5:19,217,478-19,217,720 | + | C1H5g26266 | CX5g037441 | LOC_Os05g38940 | Os05g0465000 | - | Detail |
| C2H5g20572 | 5:19,223,965-19,231,672 | - | C1H5g29457 | CX5g037912 | LOC_Os05g38950 | Os05g0465100 | - | Detail |
| C2H5g24578 | 5:19,235,155-19,235,750 | - | C1H5g08488 | CX5g039928 | LOC_Os05g38960 | Os05g0465400 | - | Detail |
| C2H5g17637 | 5:19,235,757-19,235,936 | - | C1H5g08488 | CX5g039928 | LOC_Os05g38960 | Os05g0465400 | - | Detail |
| C2H5g18626 | 5:19,241,364-19,245,819 | + | C1H5g21670 | CX5g037984 | LOC_Os05g38980 | Os05g0465800 | - | Detail |
| C2H5g30441 | 5:19,252,568-19,253,730 | - | C1H5g02280 | CX5g037393 | LOC_Os05g38990 | Os05g0466100 | - | Detail |
| C2H5g26967 | 5:19,257,046-19,259,772 | - | C1H5g22492 | CX5g037000 | LOC_Os05g39000 | Os05g0466200 | - | Detail |
| C2H5g09767 | 5:19,262,798-19,263,109 | + | C1H5g21036 | CX5g040997 | LOC_Os05g38740 | Os05g0462700 | - | Detail |
| C2H5g13581 | 5:19,264,419-19,265,837 | - | C1H5g31118 | CX5g039804 | LOC_Os05g39060 | Os05g0126800 | - | Detail |
| C2H5g06731 | 5:19,269,933-19,272,096 | + | C1H5g05117 | CX5g039967 | LOC_Os05g39070 | Os05g0466800 | - | Detail |
| C2H5g29590 | 5:19,272,713-19,277,747 | - | C1H5g14576 | CX5g037557 | LOC_Os05g39080 | Os05g0466900 | - | Detail |
| C2H5g06761 | 5:19,280,042-19,285,362 | - | C1H5g19503 | CX5g037206 | LOC_Os05g39090 | Os05g0467000 | OsCPK16 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027574 | 3:2,509,551-2,509,862 | - | C1H3g12618 | C2H3g25123 | LOC_Os03g05700 | Os03g0151500 | - | Detail |
| CX3g029524 | 3:2,511,650-2,512,333 | - | C1H3g18071 | C2H3g19949 | LOC_Os03g05710 | Os03g0151600 | - | Detail |
| CX3g027544 | 3:2,513,429-2,518,917 | + | C1H3g05811 | C2H3g16820 | LOC_Os03g05720 | Os03g0151700 | - | Detail |
| CX3g029565 | 3:2,519,864-2,523,829 | - | C1H3g17815 | C2H3g19649 | LOC_Os03g05730 | Os03g0151800 | - | Detail |
| CX3g027324 | 3:2,532,135-2,533,732 | - | C1H3g06798 | C2H3g15451 | LOC_Os03g05740 | Os03g0151900 | - | Detail |
| CX3g030512 | 3:2,541,393-2,542,827 | - | C1H3g31058 | C2H3g30386 | LOC_Os03g05750 | Os03g0152000 | - | Detail |
| CX3g026911 | 3:2,545,255-2,548,159 | + | C1H3g20082 | C2H3g26526 | LOC_Os03g05760 | Os03g0152100 | - | Detail |
| CX3g029839 | 3:2,555,135-2,556,701 | + | C1H3g31474 | C2H3g15744 | LOC_Os03g05770 | Os03g0152300 | - | Detail |
| CX3g028932 | 3:2,559,764-2,564,429 | - | C1H3g20421 | C2H3g01485 | LOC_Os03g05780 | Os03g0152400 | - | Detail |
| CX3g025626 | 3:2,573,845-2,576,394 | - | C1H3g15708 | C2H3g04206 | LOC_Os03g05800 | Os03g0152600 | - | Detail |
| CX3g028763 | 3:2,578,740-2,583,086 | + | C1H3g24101 | C2H3g16126 | LOC_Os03g05806 | Os03g0152700 | TCD3, OsPUS1 | Detail |
| CX3g028004 | 3:2,584,198-2,589,235 | + | C1H3g07789 | C2H3g23725 | LOC_Os03g05812 | Os03g0152800 | - | Detail |
| CX3g031112 | 3:2,591,045-2,597,589 | + | C1H3g06558 | C2H3g05754 | LOC_Os03g05820 | Os03g0152900 | - | Detail |
| CX3g030862 | 3:2,600,297-2,607,745 | - | C1H3g08014 | C2H3g15298 | LOC_Os03g05830 | Os03g0153000 | - | Detail |
| CX3g027085 | 3:2,648,681-2,648,968 | - | - | C2H3g08135 | - | - | - | Detail |
| CX3g026862 | 3:2,654,948-2,655,879 | + | C1H3g23253 | C2H3g13676 | LOC_Os03g06000 | Os03g0155300 | - | Detail |
| CX3g026879 | 3:2,670,161-2,671,192 | + | C1H3g29148 | C2H3g21765 | LOC_Os03g06040 | Os03g0155900 | - | Detail |
| CX3g030616 | 3:2,675,361-2,676,323 | + | C1H3g13236 | C2H3g20541 | LOC_Os03g06050 | Os03g0156000 | - | Detail |
| CX3g030362 | 3:2,679,977-2,681,322 | + | C1H3g14896 | C2H3g21016 | LOC_Os03g06050 | Os03g0156000 | - | Detail |
| CX3g028170 | 3:2,684,901-2,689,792 | + | C1H3g22589 | C2H3g26202 | LOC_Os03g06070 | Os03g0156500 | - | Detail |