| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03777 | 6:7,003,407-7,004,426 | - | - | CX6g041399 | LOC_Os06g14620 | Os06g0257450 | ST1, st1(ws1), ws1, st1, RNRS1, rnrs1, NSL2 | Detail |
| C2H6g04113 | 6:7,007,145-7,008,692 | + | C1H6g02316 | CX6g044724 | LOC_Os06g14630 | Os06g0257600 | - | Detail |
| C2H6g00648 | 6:7,026,926-7,027,972 | + | C1H6g09969 | CX6g043290 | LOC_Os06g14670 | Os06g0258000 | - | Detail |
| C2H6g03619 | 6:7,084,002-7,098,976 | + | C1H6g11559 | CX6g045764 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| C2H6g01049 | 6:7,100,001-7,107,702 | - | C1H6g18024 | CX6g044644 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| C2H6g13770 | 6:7,153,337-7,153,943 | - | C1H6g12074 | CX6g041615 | - | - | - | Detail |
| C2H6g10609 | 6:7,163,058-7,163,564 | + | C1H6g12074 | CX6g045748 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| C2H6g05565 | 6:7,164,963-7,165,619 | + | - | CX6g042529 | - | - | - | Detail |
| C2H6g15261 | 6:7,187,480-7,191,271 | - | C1H6g28805 | CX6g041283 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| C2H6g21532 | 6:7,218,192-7,219,673 | - | - | CX6g045707 | LOC_Os06g14810 | Os06g0260500 | OsCUT5 | Detail |
| C2H6g29156 | 6:7,257,704-7,259,179 | + | - | CX6g041231 | LOC_Os06g15020 | Os06g0262200 | OsCUT6 | Detail |
| C2H6g22045 | 6:7,300,310-7,301,791 | - | - | CX6g043029 | LOC_Os06g15170 | Os06g0262800 | OsCUT7 | Detail |
| C2H6g13890 | 6:7,319,272-7,320,855 | + | - | - | - | - | - | Detail |
| C2H6g18864 | 6:7,320,873-7,321,216 | + | - | - | - | - | - | Detail |
| C2H6g20291 | 6:7,321,312-7,323,501 | - | - | CX6g043029 | LOC_Os06g15250 | Os06g0263400 | OsCUT8 | Detail |
| C2H6g11848 | 6:7,340,325-7,342,073 | + | C1H6g14061 | CX6g043939 | LOC_Os06g15330 | Os06g0264200 | OsCOL16 | Detail |
| C2H6g27689 | 6:7,357,477-7,363,510 | + | C1H6g03979 | CX6g044650 | LOC_Os06g15360 | Os06g0264300 | - | Detail |
| C2H6g23695 | 6:7,373,848-7,378,740 | + | C1H6g06916 | CX6g042595 | LOC_Os06g15370 | Os06g0264500 | OsNPF3.1 | Detail |
| C2H6g28059 | 6:7,378,868-7,379,221 | - | - | CX6g043321 | LOC_Os06g15380 | Os06g0264700 | - | Detail |
| C2H6g15511 | 6:7,380,099-7,380,488 | - | - | CX6g042083 | LOC_Os06g15390 | Os06g0264700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027574 | 3:2,509,551-2,509,862 | - | C1H3g12618 | C2H3g25123 | LOC_Os03g05700 | Os03g0151500 | - | Detail |
| CX3g029524 | 3:2,511,650-2,512,333 | - | C1H3g18071 | C2H3g19949 | LOC_Os03g05710 | Os03g0151600 | - | Detail |
| CX3g027544 | 3:2,513,429-2,518,917 | + | C1H3g05811 | C2H3g16820 | LOC_Os03g05720 | Os03g0151700 | - | Detail |
| CX3g029565 | 3:2,519,864-2,523,829 | - | C1H3g17815 | C2H3g19649 | LOC_Os03g05730 | Os03g0151800 | - | Detail |
| CX3g027324 | 3:2,532,135-2,533,732 | - | C1H3g06798 | C2H3g15451 | LOC_Os03g05740 | Os03g0151900 | - | Detail |
| CX3g030512 | 3:2,541,393-2,542,827 | - | C1H3g31058 | C2H3g30386 | LOC_Os03g05750 | Os03g0152000 | - | Detail |
| CX3g026911 | 3:2,545,255-2,548,159 | + | C1H3g20082 | C2H3g26526 | LOC_Os03g05760 | Os03g0152100 | - | Detail |
| CX3g029839 | 3:2,555,135-2,556,701 | + | C1H3g31474 | C2H3g15744 | LOC_Os03g05770 | Os03g0152300 | - | Detail |
| CX3g028932 | 3:2,559,764-2,564,429 | - | C1H3g20421 | C2H3g01485 | LOC_Os03g05780 | Os03g0152400 | - | Detail |
| CX3g025626 | 3:2,573,845-2,576,394 | - | C1H3g15708 | C2H3g04206 | LOC_Os03g05800 | Os03g0152600 | - | Detail |
| CX3g028763 | 3:2,578,740-2,583,086 | + | C1H3g24101 | C2H3g16126 | LOC_Os03g05806 | Os03g0152700 | TCD3, OsPUS1 | Detail |
| CX3g028004 | 3:2,584,198-2,589,235 | + | C1H3g07789 | C2H3g23725 | LOC_Os03g05812 | Os03g0152800 | - | Detail |
| CX3g031112 | 3:2,591,045-2,597,589 | + | C1H3g06558 | C2H3g05754 | LOC_Os03g05820 | Os03g0152900 | - | Detail |
| CX3g030862 | 3:2,600,297-2,607,745 | - | C1H3g08014 | C2H3g15298 | LOC_Os03g05830 | Os03g0153000 | - | Detail |
| CX3g027085 | 3:2,648,681-2,648,968 | - | - | C2H3g08135 | - | - | - | Detail |
| CX3g026862 | 3:2,654,948-2,655,879 | + | C1H3g23253 | C2H3g13676 | LOC_Os03g06000 | Os03g0155300 | - | Detail |
| CX3g026879 | 3:2,670,161-2,671,192 | + | C1H3g29148 | C2H3g21765 | LOC_Os03g06040 | Os03g0155900 | - | Detail |
| CX3g030616 | 3:2,675,361-2,676,323 | + | C1H3g13236 | C2H3g20541 | LOC_Os03g06050 | Os03g0156000 | - | Detail |
| CX3g030362 | 3:2,679,977-2,681,322 | + | C1H3g14896 | C2H3g21016 | LOC_Os03g06050 | Os03g0156000 | - | Detail |
| CX3g028170 | 3:2,684,901-2,689,792 | + | C1H3g22589 | C2H3g26202 | LOC_Os03g06070 | Os03g0156500 | - | Detail |