| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g07096 | 2:26,569,714-26,572,122 | + | C2H2g00990 | CX2g019985 | LOC_Os02g47190 | Os02g0700300 | - | Detail |
| C1H2g17263 | 2:26,573,070-26,574,402 | - | C2H2g18781 | CX2g018946 | LOC_Os02g47200 | Os02g0700400 | AOX1C, OsAOX1c | Detail |
| C1H2g20817 | 2:26,576,566-26,579,572 | - | C2H2g13276 | CX2g022668 | LOC_Os02g47210 | Os02g0700500 | OsPUT1, PUT1 | Detail |
| C1H2g05464 | 2:26,582,274-26,587,006 | + | C2H2g21592 | CX2g021133 | LOC_Os02g47220 | Os02g0700600 | - | Detail |
| C1H2g24987 | 2:26,590,387-26,594,037 | - | C2H2g02395 | CX2g022517 | LOC_Os02g47230 | Os02g0700700 | OsBRXL1, OsBRXL2 | Detail |
| C1H2g25791 | 2:26,609,172-26,612,861 | - | C2H2g25196 | CX2g022082 | LOC_Os02g47280 | Os02g0701300 | GS2, OsGRF4, GRF4, GS2/OsGRF4, PT2, GLW2 | Detail |
| C1H2g27039 | 2:26,635,044-26,639,407 | + | C2H2g15528 | CX2g023957 | LOC_Os02g47310 | Os02g0701600 | - | Detail |
| C1H2g16179 | 2:26,639,960-26,641,086 | - | C2H2g23415 | CX2g020103 | LOC_Os02g47320 | Os04g0601700 | - | Detail |
| C1H2g12582 | 2:26,642,996-26,644,943 | + | C2H2g21402 | CX2g021360 | LOC_Os02g47350 | Os02g0701900 | - | Detail |
| C1H2g09622 | 2:26,647,658-26,651,101 | + | C2H2g02080 | CX2g022772 | LOC_Os02g47360 | Os02g0702000 | OSOTP51, SSA1 | Detail |
| C1H2g18788 | 2:26,657,284-26,660,559 | + | C2H2g00977 | CX2g019179 | LOC_Os02g47400 | Os02g0702400 | - | Detail |
| C1H2g17296 | 2:26,661,748-26,670,457 | - | C2H2g26384 | CX2g023268 | LOC_Os02g47410 | Os02g0702500 | - | Detail |
| C1H2g14738 | 2:26,675,160-26,681,475 | - | C2H2g00034 | CX2g020864 | LOC_Os02g47420 | Os02g0702600 | - | Detail |
| C1H2g23661 | 2:26,690,376-26,696,845 | - | C2H2g04827 | CX2g020499 | LOC_Os02g47440 | Os02g0702800 | OsSYP21 | Detail |
| C1H2g10840 | 2:26,700,548-26,701,372 | + | C2H2g13380 | CX2g023044 | LOC_Os02g47450 | Os02g0703300 | - | Detail |
| C1H2g06866 | 2:26,713,872-26,715,795 | + | C2H2g24088 | CX2g021944 | LOC_Os02g45280 | Os02g0703600 | OsABA8ox1, CYP707A5 | Detail |
| C1H2g27896 | 2:26,727,221-26,730,378 | + | C2H2g26119 | CX2g022994 | LOC_Os02g47500 | Os02g0703900 | - | Detail |
| C1H2g28522 | 2:26,744,905-26,749,591 | - | C2H2g28790 | CX2g020240 | LOC_Os02g47560 | Os02g0704300 | OsDNA2_6 | Detail |
| C1H2g16636 | 2:26,753,027-26,755,301 | + | C2H2g08817 | CX2g021465 | LOC_Os02g47570 | Os02g0704500 | - | Detail |
| C1H2g16073 | 2:26,755,896-26,760,316 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002486 | 1:13,284,447-13,284,999 | + | - | - | - | - | - | Detail |
| CX1g006476 | 1:13,293,919-13,294,191 | + | - | - | - | - | - | Detail |
| CX1g007156 | 1:13,297,374-13,303,855 | + | C1H1g17978 | C2H1g11897 | LOC_Os01g25484 | Os01g0357100 | - | Detail |
| CX1g000806 | 1:13,323,028-13,325,972 | + | C1H1g01968 | C2H1g22026 | LOC_Os01g25530 | Os01g0357800 | - | Detail |
| CX1g000847 | 1:13,344,578-13,344,850 | + | - | - | - | Os09g0276600 | - | Detail |
| CX1g005070 | 1:13,353,605-13,359,175 | - | C1H1g30276 | C2H1g25270 | LOC_Os01g25600 | Os01g0358300 | - | Detail |
| CX1g001263 | 1:13,359,490-13,361,191 | + | C1H1g20203 | C2H1g10144 | LOC_Os01g25610 | Os01g0358400 | - | Detail |
| CX1g004543 | 1:13,386,929-13,391,725 | - | C1H1g24472 | C2H1g25540 | LOC_Os01g25630 | Os01g0358700 | - | Detail |
| CX1g003464 | 1:13,401,786-13,406,004 | - | C1H1g10195 | C2H1g08239 | LOC_Os01g25720 | Os01g0359400 | - | Detail |
| CX1g001475 | 1:13,423,296-13,423,568 | + | - | - | LOC_Os01g29290 | - | - | Detail |
| CX1g001006 | 1:13,426,621-13,430,616 | - | C1H1g24472 | C2H1g10155 | LOC_Os01g25740 | Os01g0359600 | - | Detail |
| CX1g006302 | 1:13,437,279-13,446,372 | - | C1H1g08669 | C2H1g09088 | LOC_Os01g25760 | Os01g0359800 | - | Detail |
| CX1g006779 | 1:13,454,699-13,454,851 | + | - | - | - | Os01g0612350 | - | Detail |
| CX1g003375 | 1:13,460,325-13,460,765 | + | - | - | LOC_Os01g25800 | Os01g0360150 | - | Detail |
| CX1g005188 | 1:13,479,710-13,484,700 | - | C1H1g22392 | C2H1g17762 | LOC_Os01g25820 | Os01g0360200 | - | Detail |
| CX1g000553 | 1:13,501,045-13,501,365 | - | - | - | - | - | - | Detail |
| CX1g006931 | 1:13,512,506-13,514,401 | - | C1H1g17695 | C2H1g27512 | LOC_Os01g25880 | Os01g0360600 | - | Detail |
| CX1g004889 | 1:13,569,409-13,573,709 | - | C1H1g04686 | C2H1g18033 | LOC_Os01g26000 | Os01g0362100 | - | Detail |
| CX1g001934 | 1:13,570,700-13,571,041 | + | - | - | - | Os01g0361800 | - | Detail |
| CX1g002210 | 1:13,577,597-13,579,593 | + | C1H1g26641 | C2H1g29968 | LOC_Os01g26020 | Os01g0362000 | - | Detail |