| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g29597 | 1:10,475,552-10,479,083 | - | C1H1g25209 | CX1g003199 | LOC_Os01g21180 | Os01g0314300 | - | Detail |
| C2H1g29491 | 1:10,491,646-10,501,148 | + | C1H1g16998 | CX1g000744 | LOC_Os01g12130 | Os01g0314600 | - | Detail |
| C2H1g14843 | 1:10,504,528-10,509,510 | + | C1H1g13637 | CX1g002764 | LOC_Os01g21240 | Os01g0603100 | - | Detail |
| C2H1g24956 | 1:10,508,695-10,509,473 | - | C1H1g06454 | CX1g005523 | - | Os01g0875000 | - | Detail |
| C2H1g17632 | 1:10,530,987-10,531,404 | - | C1H1g25861 | CX1g002182 | LOC_Os01g21250 | Os01g0314800 | OsLEA9, qCTB1e | Detail |
| C2H1g12277 | 1:10,542,226-10,550,175 | + | C1H1g23934 | CX1g000287 | LOC_Os01g21310 | Os01g0315700 | - | Detail |
| C2H1g04682 | 1:10,550,299-10,554,757 | - | C1H1g05468 | CX1g003327 | LOC_Os01g21320 | Os01g0315800 | - | Detail |
| C2H1g21130 | 1:10,573,171-10,575,028 | - | C1H1g27049 | CX1g000332 | LOC_Os01g21410 | Os01g0316500 | - | Detail |
| C2H1g00911 | 1:10,577,185-10,583,056 | + | C1H1g05119 | CX1g005300 | LOC_Os01g21420 | Os01g0316600 | OsSR40 | Detail |
| C2H1g00121 | 1:10,592,012-10,593,309 | + | C1H1g21030 | CX1g001744 | LOC_Os01g21440 | Os01g0316800 | - | Detail |
| C2H1g10654 | 1:10,595,420-10,603,187 | + | C1H1g29623 | CX1g001212 | LOC_Os01g21450 | Os01g0316900 | - | Detail |
| C2H1g14129 | 1:10,650,536-10,652,176 | + | C1H1g25248 | - | LOC_Os01g21590 | Os01g0318400 | - | Detail |
| C2H1g18874 | 1:10,666,638-10,671,270 | + | C1H1g15013 | CX1g004299 | LOC_Os01g21610 | Os01g0318700 | - | Detail |
| C2H1g27201 | 1:10,681,107-10,686,406 | + | C1H1g07894 | CX1g002708 | LOC_Os01g21630 | Os01g0319000 | - | Detail |
| C2H1g29661 | 1:10,728,605-10,729,063 | - | C1H1g27701 | CX1g005000 | LOC_Os01g21740 | Os01g0320400 | - | Detail |
| C2H1g09744 | 1:10,751,172-10,751,668 | + | C1H1g08165 | CX1g006454 | LOC_Os01g21800 | - | - | Detail |
| C2H1g03466 | 1:10,755,999-10,769,180 | - | C1H1g21917 | CX1g006680 | LOC_Os01g21820 | Os01g0321300 | - | Detail |
| C2H1g20739 | 1:10,771,699-10,776,659 | - | C1H1g08985 | CX1g000470 | LOC_Os01g21850 | Os01g0321700 | - | Detail |
| C2H1g26200 | 1:10,776,615-10,778,529 | + | C1H1g24259 | - | - | - | - | Detail |
| C2H1g19595 | 1:10,780,501-10,784,680 | + | C1H1g23145 | CX1g003282 | LOC_Os01g21860 | Os01g0321800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028095 | 3:2,355,621-2,356,202 | + | C1H3g11420 | C2H3g11846 | LOC_Os03g05430 | Os03g0147900 | - | Detail |
| CX3g027224 | 3:2,358,598-2,360,848 | - | C1H3g01679 | C2H3g18230 | LOC_Os03g05440 | Os03g0148000 | - | Detail |
| CX3g025933 | 3:2,368,173-2,369,229 | - | C1H3g05732 | C2H3g10578 | LOC_Os03g05450 | Os03g0148300 | - | Detail |
| CX3g026676 | 3:2,371,426-2,372,760 | - | C1H3g20087 | C2H3g08315 | LOC_Os03g05460 | Os03g0148400 | - | Detail |
| CX3g026748 | 3:2,379,388-2,382,923 | + | C1H3g24625 | C2H3g07329 | LOC_Os03g05470 | Os03g0148700 | - | Detail |
| CX3g025264 | 3:2,386,441-2,388,658 | - | C1H3g03956 | C2H3g09418 | LOC_Os03g05480 | Os03g0148800 | - | Detail |
| CX3g028941 | 3:2,390,662-2,391,294 | - | - | - | LOC_Os03g05490 | - | - | Detail |
| CX3g031194 | 3:2,396,027-2,396,657 | + | C1H3g20130 | C2H3g30161 | LOC_Os03g05500 | Os03g0149000 | - | Detail |
| CX3g024956 | 3:2,399,650-2,400,507 | - | C1H3g20743 | C2H3g15126 | LOC_Os03g05510 | Os03g0149100 | CRL1, crl1, crl1*, ARL1, ARL1/CRL1 | Detail |
| CX3g027575 | 3:2,411,551-2,414,644 | - | C1H3g13230 | C2H3g27191 | LOC_Os03g05520 | Os03g0149200 | - | Detail |
| CX3g026711 | 3:2,420,663-2,422,932 | - | C1H3g28897 | C2H3g02809 | LOC_Os03g05530 | Os03g0149300 | - | Detail |
| CX3g029578 | 3:2,428,167-2,430,879 | + | C1H3g27908 | C2H3g29786 | LOC_Os03g05540 | Os03g0149400 | - | Detail |
| CX3g030199 | 3:2,439,282-2,440,208 | - | C1H3g00185 | C2H3g01040 | LOC_Os03g05560 | Os03g0149700 | - | Detail |
| CX3g028233 | 3:2,446,786-2,447,685 | - | C1H3g00155 | C2H3g29045 | LOC_Os03g05570 | Os03g0149800 | - | Detail |
| CX3g030128 | 3:2,463,485-2,463,910 | + | C1H3g19498 | C2H3g13096 | LOC_Os03g05590 | Os03g0150200 | OsAP23 | Detail |
| CX3g030522 | 3:2,466,116-2,467,741 | + | C1H3g28178 | C2H3g29028 | LOC_Os03g05610 | Os03g0150500 | - | Detail |
| CX3g029750 | 3:2,469,565-2,471,148 | - | C1H3g29432 | C2H3g30077 | LOC_Os03g05620 | Os03g0150600 | - | Detail |
| CX3g028575 | 3:2,485,064-2,486,650 | - | C1H3g04203 | C2H3g28429 | LOC_Os03g05640 | Os03g0150800 | PT2, OsPT2, PTH1-2, OsPht1;2 | Detail |
| CX3g030168 | 3:2,491,437-2,496,078 | - | C1H3g13409 | C2H3g24713 | LOC_Os03g05660 | Os03g0151100 | - | Detail |
| CX3g028756 | 3:2,500,246-2,508,833 | + | C1H3g18077 | C2H3g23634 | LOC_Os03g05680 | Os03g0151300 | Se14 | Detail |