| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g14461 | 2:27,983,381-27,985,425 | - | C1H2g00972 | CX2g020051 | LOC_Os02g49880 | Os02g0731700 | OsK, Ghd2 | Detail |
| C2H2g05011 | 2:28,001,819-28,003,276 | + | C1H2g08007 | CX2g023216 | LOC_Os02g49920 | Os02g0731900 | OsCUT2 | Detail |
| C2H2g12585 | 2:28,009,364-28,013,958 | + | C1H2g22578 | CX2g022879 | LOC_Os02g49950 | Os02g0732200 | - | Detail |
| C2H2g26422 | 2:28,016,168-28,017,969 | + | C1H2g08019 | - | LOC_Os02g49960 | Os02g0732300 | - | Detail |
| C2H2g20922 | 2:28,025,782-28,026,672 | + | C1H2g28110 | CX2g019464 | LOC_Os02g49970 | Os02g0732400 | - | Detail |
| C2H2g17194 | 2:28,029,944-28,033,017 | - | C1H2g10850 | CX2g023132 | LOC_Os02g49980 | Os02g0732500 | - | Detail |
| C2H2g26612 | 2:28,036,294-28,037,331 | - | C1H2g05502 | CX2g021353 | LOC_Os02g49986 | Os02g0732600 | Os2R_MYB30 | Detail |
| C2H2g25135 | 2:28,038,484-28,050,004 | - | C1H2g24742 | CX2g020946 | LOC_Os02g49992 | Os02g0732700 | - | Detail |
| C2H2g26888 | 2:28,050,947-28,052,542 | - | C1H2g27424 | CX2g023389 | LOC_Os02g50000 | Os02g0732800 | - | Detail |
| C2H2g07391 | 2:28,053,843-28,057,196 | + | C1H2g26386 | CX2g020808 | LOC_Os02g50010 | Os02g0732900 | - | Detail |
| C2H2g23355 | 2:28,057,447-28,059,601 | - | C1H2g27002 | CX2g019891 | LOC_Os02g50020 | Os02g0733001 | - | Detail |
| C2H2g17859 | 2:28,065,683-28,068,761 | + | C1H2g31248 | CX2g019255 | LOC_Os02g50040 | Os02g0733300 | OsGH9B1 | Detail |
| C2H2g23239 | 2:28,069,133-28,069,789 | - | C1H2g05277 | CX2g024096 | LOC_Os02g50050 | Os02g0733400 | - | Detail |
| C2H2g09796 | 2:28,071,260-28,071,796 | - | C1H2g28250 | CX2g023041 | LOC_Os02g50060 | Os02g0733500 | - | Detail |
| C2H2g06681 | 2:28,073,838-28,074,380 | - | - | - | - | - | - | Detail |
| C2H2g29637 | 2:28,078,545-28,081,151 | + | C1H2g25545 | CX2g024530 | LOC_Os02g50100 | Os02g0733800 | - | Detail |
| C2H2g26091 | 2:28,081,751-28,081,993 | - | - | CX2g020845 | LOC_Os02g50110 | Os02g0733900 | OsSYL2 | Detail |
| C2H2g14181 | 2:28,100,291-28,100,920 | + | C1H2g09486 | CX2g019678 | LOC_Os02g50130 | Os02g0734300 | - | Detail |
| C2H2g24179 | 2:28,113,048-28,114,363 | + | C1H2g30933 | - | LOC_Os02g50140 | Os02g0734400 | - | Detail |
| C2H2g04511 | 2:28,118,219-28,120,246 | + | C1H2g30933 | - | LOC_Os02g50174 | Os02g0734500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028095 | 3:2,355,621-2,356,202 | + | C1H3g11420 | C2H3g11846 | LOC_Os03g05430 | Os03g0147900 | - | Detail |
| CX3g027224 | 3:2,358,598-2,360,848 | - | C1H3g01679 | C2H3g18230 | LOC_Os03g05440 | Os03g0148000 | - | Detail |
| CX3g025933 | 3:2,368,173-2,369,229 | - | C1H3g05732 | C2H3g10578 | LOC_Os03g05450 | Os03g0148300 | - | Detail |
| CX3g026676 | 3:2,371,426-2,372,760 | - | C1H3g20087 | C2H3g08315 | LOC_Os03g05460 | Os03g0148400 | - | Detail |
| CX3g026748 | 3:2,379,388-2,382,923 | + | C1H3g24625 | C2H3g07329 | LOC_Os03g05470 | Os03g0148700 | - | Detail |
| CX3g025264 | 3:2,386,441-2,388,658 | - | C1H3g03956 | C2H3g09418 | LOC_Os03g05480 | Os03g0148800 | - | Detail |
| CX3g028941 | 3:2,390,662-2,391,294 | - | - | - | LOC_Os03g05490 | - | - | Detail |
| CX3g031194 | 3:2,396,027-2,396,657 | + | C1H3g20130 | C2H3g30161 | LOC_Os03g05500 | Os03g0149000 | - | Detail |
| CX3g024956 | 3:2,399,650-2,400,507 | - | C1H3g20743 | C2H3g15126 | LOC_Os03g05510 | Os03g0149100 | CRL1, crl1, crl1*, ARL1, ARL1/CRL1 | Detail |
| CX3g027575 | 3:2,411,551-2,414,644 | - | C1H3g13230 | C2H3g27191 | LOC_Os03g05520 | Os03g0149200 | - | Detail |
| CX3g026711 | 3:2,420,663-2,422,932 | - | C1H3g28897 | C2H3g02809 | LOC_Os03g05530 | Os03g0149300 | - | Detail |
| CX3g029578 | 3:2,428,167-2,430,879 | + | C1H3g27908 | C2H3g29786 | LOC_Os03g05540 | Os03g0149400 | - | Detail |
| CX3g030199 | 3:2,439,282-2,440,208 | - | C1H3g00185 | C2H3g01040 | LOC_Os03g05560 | Os03g0149700 | - | Detail |
| CX3g028233 | 3:2,446,786-2,447,685 | - | C1H3g00155 | C2H3g29045 | LOC_Os03g05570 | Os03g0149800 | - | Detail |
| CX3g030128 | 3:2,463,485-2,463,910 | + | C1H3g19498 | C2H3g13096 | LOC_Os03g05590 | Os03g0150200 | OsAP23 | Detail |
| CX3g030522 | 3:2,466,116-2,467,741 | + | C1H3g28178 | C2H3g29028 | LOC_Os03g05610 | Os03g0150500 | - | Detail |
| CX3g029750 | 3:2,469,565-2,471,148 | - | C1H3g29432 | C2H3g30077 | LOC_Os03g05620 | Os03g0150600 | - | Detail |
| CX3g028575 | 3:2,485,064-2,486,650 | - | C1H3g04203 | C2H3g28429 | LOC_Os03g05640 | Os03g0150800 | PT2, OsPT2, PTH1-2, OsPht1;2 | Detail |
| CX3g030168 | 3:2,491,437-2,496,078 | - | C1H3g13409 | C2H3g24713 | LOC_Os03g05660 | Os03g0151100 | - | Detail |
| CX3g028756 | 3:2,500,246-2,508,833 | + | C1H3g18077 | C2H3g23634 | LOC_Os03g05680 | Os03g0151300 | Se14 | Detail |