| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g28046 | 12:12,223,758-12,226,091 | - | - | CX12g015966 | LOC_Os12g24330 | Os12g0431300 | - | Detail |
| C1H12g16885 | 12:12,240,341-12,242,141 | + | C2H12g16529 | CX12g018511 | LOC_Os12g24390 | Os12g0431700 | - | Detail |
| C1H12g31271 | 12:12,261,135-12,262,103 | - | C2H12g01862 | CX12g015483 | LOC_Os12g24140 | Os12g0432000 | - | Detail |
| C1H12g09328 | 12:12,299,852-12,300,409 | + | C2H12g10767 | CX12g017108 | LOC_Os12g24490 | Os12g0432600 | - | Detail |
| C1H12g17763 | 12:12,320,549-12,321,667 | - | - | - | - | - | - | Detail |
| C1H12g01818 | 12:12,334,770-12,342,916 | - | C2H12g22841 | CX12g016145 | LOC_Os12g24540 | Os12g0433200 | - | Detail |
| C1H12g23644 | 12:12,348,647-12,360,635 | - | C2H12g15618 | CX12g016494 | LOC_Os12g24550 | Os12g0433500 | - | Detail |
| C1H12g14351 | 12:12,369,190-12,371,519 | + | C2H12g05476 | - | LOC_Os12g24580 | Os12g0433700 | - | Detail |
| C1H12g23524 | 12:12,426,868-12,432,465 | + | C2H12g01529 | CX12g015536 | LOC_Os12g24650 | Os12g0434400 | - | Detail |
| C1H12g19273 | 12:12,517,610-12,520,527 | - | C2H12g00049 | CX12g018731 | LOC_Os12g24800 | Os12g0435200 | OsCCD4b | Detail |
| C1H12g05019 | 12:12,569,864-12,570,082 | - | C2H12g11113 | CX12g015912 | - | Os12g0548401 | - | Detail |
| C1H12g22930 | 12:12,583,474-12,584,084 | - | C2H12g23339 | CX12g016320 | LOC_Os12g25120 | Os12g0438000 | - | Detail |
| C1H12g20658 | 12:12,589,815-12,590,260 | - | C2H12g21121 | CX12g017421 | LOC_Os12g25130 | Os12g0438100 | - | Detail |
| C1H12g03456 | 12:12,628,202-12,629,902 | + | C2H12g19954 | CX12g015850 | LOC_Os12g25170 | Os12g0438300 | - | Detail |
| C1H12g23538 | 12:12,632,212-12,634,841 | + | C2H12g19954 | CX12g015850 | LOC_Os12g25180 | Os12g0438400 | - | Detail |
| C1H12g00042 | 12:12,695,178-12,698,618 | - | C2H12g29393 | CX12g018260 | LOC_Os12g25200 | Os12g0438600 | - | Detail |
| C1H12g27556 | 12:12,709,992-12,710,282 | - | C2H12g10340 | - | LOC_Os12g25210 | Os12g0438900 | - | Detail |
| C1H12g10711 | 12:12,915,027-12,916,445 | + | - | - | LOC_Os09g04680 | - | - | Detail |
| C1H12g03044 | 12:12,918,225-12,920,540 | - | C2H12g16836 | CX12g018024 | LOC_Os12g25450 | Os12g0441300 | OsASMT18 | Detail |
| C1H12g28305 | 12:12,954,451-12,956,333 | - | C2H12g23920 | CX12g016162 | LOC_Os12g25490 | Os12g0441600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028095 | 3:2,355,621-2,356,202 | + | C1H3g11420 | C2H3g11846 | LOC_Os03g05430 | Os03g0147900 | - | Detail |
| CX3g027224 | 3:2,358,598-2,360,848 | - | C1H3g01679 | C2H3g18230 | LOC_Os03g05440 | Os03g0148000 | - | Detail |
| CX3g025933 | 3:2,368,173-2,369,229 | - | C1H3g05732 | C2H3g10578 | LOC_Os03g05450 | Os03g0148300 | - | Detail |
| CX3g026676 | 3:2,371,426-2,372,760 | - | C1H3g20087 | C2H3g08315 | LOC_Os03g05460 | Os03g0148400 | - | Detail |
| CX3g026748 | 3:2,379,388-2,382,923 | + | C1H3g24625 | C2H3g07329 | LOC_Os03g05470 | Os03g0148700 | - | Detail |
| CX3g025264 | 3:2,386,441-2,388,658 | - | C1H3g03956 | C2H3g09418 | LOC_Os03g05480 | Os03g0148800 | - | Detail |
| CX3g028941 | 3:2,390,662-2,391,294 | - | - | - | LOC_Os03g05490 | - | - | Detail |
| CX3g031194 | 3:2,396,027-2,396,657 | + | C1H3g20130 | C2H3g30161 | LOC_Os03g05500 | Os03g0149000 | - | Detail |
| CX3g024956 | 3:2,399,650-2,400,507 | - | C1H3g20743 | C2H3g15126 | LOC_Os03g05510 | Os03g0149100 | CRL1, crl1, crl1*, ARL1, ARL1/CRL1 | Detail |
| CX3g027575 | 3:2,411,551-2,414,644 | - | C1H3g13230 | C2H3g27191 | LOC_Os03g05520 | Os03g0149200 | - | Detail |
| CX3g026711 | 3:2,420,663-2,422,932 | - | C1H3g28897 | C2H3g02809 | LOC_Os03g05530 | Os03g0149300 | - | Detail |
| CX3g029578 | 3:2,428,167-2,430,879 | + | C1H3g27908 | C2H3g29786 | LOC_Os03g05540 | Os03g0149400 | - | Detail |
| CX3g030199 | 3:2,439,282-2,440,208 | - | C1H3g00185 | C2H3g01040 | LOC_Os03g05560 | Os03g0149700 | - | Detail |
| CX3g028233 | 3:2,446,786-2,447,685 | - | C1H3g00155 | C2H3g29045 | LOC_Os03g05570 | Os03g0149800 | - | Detail |
| CX3g030128 | 3:2,463,485-2,463,910 | + | C1H3g19498 | C2H3g13096 | LOC_Os03g05590 | Os03g0150200 | OsAP23 | Detail |
| CX3g030522 | 3:2,466,116-2,467,741 | + | C1H3g28178 | C2H3g29028 | LOC_Os03g05610 | Os03g0150500 | - | Detail |
| CX3g029750 | 3:2,469,565-2,471,148 | - | C1H3g29432 | C2H3g30077 | LOC_Os03g05620 | Os03g0150600 | - | Detail |
| CX3g028575 | 3:2,485,064-2,486,650 | - | C1H3g04203 | C2H3g28429 | LOC_Os03g05640 | Os03g0150800 | PT2, OsPT2, PTH1-2, OsPht1;2 | Detail |
| CX3g030168 | 3:2,491,437-2,496,078 | - | C1H3g13409 | C2H3g24713 | LOC_Os03g05660 | Os03g0151100 | - | Detail |
| CX3g028756 | 3:2,500,246-2,508,833 | + | C1H3g18077 | C2H3g23634 | LOC_Os03g05680 | Os03g0151300 | Se14 | Detail |