| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g21630 | 12:19,495,082-19,500,363 | + | C1H12g09007 | CX12g015608 | LOC_Os12g38110 | Os12g0568800 | - | Detail |
| C2H12g09314 | 12:19,502,683-19,503,363 | + | C1H12g02048 | CX12g016110 | LOC_Os12g38120 | Os12g0568900 | - | Detail |
| C2H12g01725 | 12:19,508,960-19,509,454 | + | C1H12g18175 | CX12g016216 | LOC_Os12g38140 | Os12g0569200 | - | Detail |
| C2H12g10251 | 12:19,523,987-19,524,682 | + | C1H12g06244 | CX12g016111 | LOC_Os12g38150 | Os12g0569300 | OsOSM2 | Detail |
| C2H12g16373 | 12:19,531,758-19,532,462 | + | C1H12g28088 | CX12g018210 | LOC_Os12g38170 | Os12g0569500 | OsOSM1 | Detail |
| C2H12g12141 | 12:19,535,575-19,540,875 | + | C1H12g30666 | CX12g016733 | - | Os12g0569700 | - | Detail |
| C2H12g20078 | 12:19,547,901-19,549,374 | + | C1H12g00168 | CX12g018309 | LOC_Os12g38200 | Os12g0590700 | - | Detail |
| C2H12g18880 | 12:19,556,496-19,561,639 | - | C1H12g10303 | CX12g018422 | LOC_Os12g38210 | Os12g0570000 | SPL11 | Detail |
| C2H12g04128 | 12:19,569,888-19,570,472 | - | C1H12g24928 | CX12g016731 | LOC_Os12g38230 | Os12g0570300 | - | Detail |
| C2H12g09583 | 12:19,576,765-19,577,397 | + | C1H12g24952 | CX12g015447 | LOC_Os12g38250 | Os12g0570400 | - | Detail |
| C2H12g26301 | 12:19,578,296-19,583,174 | + | C1H12g04792 | CX12g017144 | LOC_Os12g38260 | Os12g0570500 | - | Detail |
| C2H12g00566 | 12:19,585,515-19,586,089 | + | C1H12g24857 | CX12g017124 | LOC_Os12g38270 | Os12g0570700 | - | Detail |
| C2H12g13163 | 12:19,590,359-19,591,046 | + | C1H12g22227 | CX12g017124 | LOC_Os12g38290 | Os12g0571000 | - | Detail |
| C2H12g18304 | 12:19,592,855-19,593,487 | + | C1H12g10209 | CX12g017124 | LOC_Os12g38290 | Os12g0571100 | MTI4C, MT-1-4b, OsMT1d, OsMT-I-4c | Detail |
| C2H12g08353 | 12:19,594,388-19,595,845 | + | C1H12g31880 | CX12g018738 | LOC_Os12g38310 | Os12g0571200 | - | Detail |
| C2H12g09891 | 12:19,597,833-19,598,603 | - | C1H12g16299 | CX12g015965 | LOC_Os12g38320 | Os12g0571300 | - | Detail |
| C2H12g06418 | 12:19,607,776-19,608,225 | - | C1H12g29524 | CX12g015646 | - | - | - | Detail |
| C2H12g12045 | 12:19,613,492-19,613,893 | + | C1H12g00013 | CX12g018241 | LOC_Os12g38340 | Os12g0571500 | - | Detail |
| C2H12g22265 | 12:19,616,933-19,617,367 | + | C1H12g14796 | CX12g017618 | LOC_Os12g38350 | Os12g0571600 | - | Detail |
| C2H12g04558 | 12:19,619,310-19,619,678 | + | C1H12g13878 | CX12g017487 | LOC_Os12g38360 | Os12g0571700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029285 | 3:2,035,275-2,038,482 | + | C1H3g01474 | C2H3g05277 | LOC_Os03g04740 | Os03g0140900 | - | Detail |
| CX3g030261 | 3:2,039,237-2,040,954 | + | C1H3g10114 | C2H3g19470 | LOC_Os03g04750 | Os03g0141000 | - | Detail |
| CX3g026884 | 3:2,042,998-2,045,811 | + | C1H3g00645 | C2H3g09892 | LOC_Os03g04770 | Os03g0141200 | OsBMY4 | Detail |
| CX3g027175 | 3:2,051,866-2,052,048 | + | - | - | - | - | - | Detail |
| CX3g027335 | 3:2,060,139-2,062,473 | + | C1H3g03155 | C2H3g24637 | LOC_Os03g04840 | Os03g0141800 | - | Detail |
| CX3g030528 | 3:2,078,077-2,081,783 | + | C1H3g31558 | C2H3g26010 | LOC_Os03g04890 | Os03g0142500 | - | Detail |
| CX3g030147 | 3:2,082,639-2,083,594 | - | C1H3g10254 | C2H3g05143 | LOC_Os03g04900 | Os03g0142600 | Os2R_MYB33 | Detail |
| CX3g030977 | 3:2,105,140-2,110,795 | + | C1H3g19270 | C2H3g20094 | LOC_Os03g04920 | Os03g0142800 | - | Detail |
| CX3g029043 | 3:2,112,185-2,117,251 | - | C1H3g30404 | C2H3g26910 | LOC_Os03g04930 | Os03g0142900 | - | Detail |
| CX3g028566 | 3:2,119,844-2,123,535 | - | C1H3g30626 | C2H3g17004 | LOC_Os03g04940 | Os03g0826700 | - | Detail |
| CX3g030204 | 3:2,123,891-2,124,359 | - | C1H3g30626 | C2H3g17004 | LOC_Os03g04940 | Os03g0143000 | - | Detail |
| CX3g025128 | 3:2,126,356-2,128,707 | + | C1H3g27298 | C2H3g18870 | LOC_Os03g04950 | Os03g0143100 | OsSDD1 | Detail |
| CX3g027250 | 3:2,135,843-2,139,290 | - | C1H3g02218 | C2H3g00510 | LOC_Os03g04960 | Os03g0143300 | - | Detail |
| CX3g029237 | 3:2,140,305-2,145,189 | - | C1H3g27270 | C2H3g20943 | LOC_Os03g04970 | Os03g0143400 | - | Detail |
| CX3g027862 | 3:2,147,187-2,150,280 | + | C1H3g30154 | C2H3g27834 | LOC_Os03g04980 | Os03g0143600 | - | Detail |
| CX3g030942 | 3:2,153,418-2,156,690 | + | C1H3g31666 | C2H3g13054 | LOC_Os03g04990 | Os03g0143700 | - | Detail |
| CX3g030855 | 3:2,160,489-2,177,104 | + | C1H3g05683 | C2H3g11174 | LOC_Os03g05020 | Os03g0143800 | LPL2 | Detail |
| CX3g030717 | 3:2,177,629-2,178,456 | + | C1H3g03140 | C2H3g25262 | LOC_Os03g05030 | Os03g0143900 | - | Detail |
| CX3g027941 | 3:2,178,815-2,183,490 | - | C1H3g19361 | C2H3g25681 | LOC_Os03g05040 | Os03g0144000 | MEICA1 | Detail |
| CX3g027332 | 3:2,185,457-2,185,702 | - | - | - | - | - | - | Detail |