| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g13906 | 9:10,526,453-10,527,404 | + | C1H11g19220 | - | - | - | - | Detail |
| C2H9g09333 | 9:10,527,877-10,528,218 | + | C1H9g29795 | - | LOC_Os09g20490 | Os09g0371100 | - | Detail |
| C2H9g11466 | 9:10,530,032-10,531,134 | + | C1H9g15773 | - | LOC_Os09g20490 | Os09g0371100 | - | Detail |
| C2H9g23354 | 9:10,532,417-10,535,599 | + | C1H9g10150 | - | LOC_Os09g20500 | Os09g0371200 | - | Detail |
| C2H9g03171 | 9:10,536,862-10,539,182 | + | C1H9g30442 | - | LOC_Os09g20510 | Os09g0371100 | - | Detail |
| C2H9g13661 | 9:10,544,468-10,546,035 | + | C1H9g14290 | - | LOC_Os09g20520 | Os09g0371100 | - | Detail |
| C2H9g29737 | 9:10,554,477-10,560,684 | + | C1H9g13255 | CX9g056822 | LOC_Os09g20550 | Os09g0371700 | - | Detail |
| C2H9g20914 | 9:10,561,925-10,565,103 | + | C1H9g24353 | CX9g058116 | LOC_Os09g20560 | Os09g0371800 | - | Detail |
| C2H9g18955 | 9:10,585,786-10,591,397 | + | C1H9g04374 | CX9g056699 | LOC_Os09g20590 | Os09g0372400 | - | Detail |
| C2H9g10145 | 9:10,601,604-10,603,596 | + | C1H9g21178 | CX9g056705 | LOC_Os09g20630 | Os09g0372700 | - | Detail |
| C2H9g01317 | 9:10,604,395-10,607,685 | - | C1H9g28427 | CX9g057006 | LOC_Os09g20640 | Os09g0372800 | - | Detail |
| C2H9g10794 | 9:10,608,021-10,612,634 | + | C1H9g11515 | CX9g057473 | - | - | - | Detail |
| C2H9g13192 | 9:10,621,930-10,623,712 | - | C1H9g18641 | CX9g055929 | LOC_Os09g20660 | Os09g0373000 | - | Detail |
| C2H9g08105 | 9:10,630,837-10,639,896 | + | C1H9g22651 | CX9g055437 | LOC_Os09g20684 | Os09g0374900 | - | Detail |
| C2H9g08653 | 9:10,646,349-10,647,440 | + | C1H9g22651 | CX9g055662 | LOC_Os09g20684 | Os09g0374900 | - | Detail |
| C2H9g25240 | 9:10,652,624-10,653,133 | + | C1H9g24076 | CX9g055662 | LOC_Os09g20684 | Os09g0374900 | - | Detail |
| C2H9g05799 | 9:10,684,770-10,685,813 | - | C1H9g01978 | CX9g055547 | LOC_Os09g20740 | Os09g0373800 | - | Detail |
| C2H9g15195 | 9:10,690,096-10,691,348 | - | C1H9g05244 | CX9g055547 | LOC_Os09g20750 | - | - | Detail |
| C2H9g05168 | 9:10,718,725-10,722,433 | + | C1H9g03757 | CX9g055647 | LOC_Os09g20810 | Os09g0374900 | - | Detail |
| C2H9g15335 | 9:10,723,292-10,727,579 | - | C1H9g08490 | CX9g057566 | LOC_Os09g20820 | Os09g0375000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025982 | 3:1,900,714-1,904,222 | + | C1H3g12595 | C2H3g19333 | LOC_Os03g04500 | Os03g0138000 | - | Detail |
| CX3g027153 | 3:1,906,424-1,913,688 | - | - | - | LOC_Os03g04520 | Os03g0138100 | - | Detail |
| CX3g028238 | 3:1,918,113-1,919,681 | + | C1H3g03175 | C2H3g18481 | LOC_Os03g04530 | Os03g0138200 | - | Detail |
| CX3g028187 | 3:1,922,527-1,922,799 | + | C1H3g14282 | C2H3g15460 | LOC_Os03g04545 | Os03g0138400 | - | Detail |
| CX3g026784 | 3:1,928,068-1,929,577 | + | C1H3g10085 | C2H3g21651 | LOC_Os03g04550 | Os03g0138500 | - | Detail |
| CX3g030039 | 3:1,930,264-1,933,737 | - | C1H3g00368 | C2H3g00575 | LOC_Os03g04560 | Os03g0138600 | - | Detail |
| CX3g028744 | 3:1,936,705-1,941,027 | - | C1H3g01644 | C2H3g22416 | LOC_Os03g04570 | Os03g0138700 | OsPTR1 | Detail |
| CX3g028323 | 3:1,943,894-1,944,877 | + | C1H3g14228 | C2H3g08919 | LOC_Os03g04580 | Os03g0138900 | - | Detail |
| CX3g027627 | 3:1,946,622-1,948,947 | + | C1H3g13763 | C2H3g29903 | LOC_Os03g04590 | Os03g0139100 | - | Detail |
| CX3g030974 | 3:1,949,805-1,955,095 | - | C1H3g21758 | C2H3g28589 | LOC_Os03g04600 | Os03g0139200 | - | Detail |
| CX3g025022 | 3:1,958,278-1,959,243 | + | C1H3g05378 | C2H3g22571 | LOC_Os03g04610 | Os03g0139400 | - | Detail |
| CX3g025825 | 3:1,960,889-1,964,535 | - | C1H3g00456 | C2H3g01677 | LOC_Os03g04620 | Os03g0139500 | - | Detail |
| CX3g025500 | 3:2,011,751-2,013,370 | + | C1H3g15064 | C2H3g29153 | LOC_Os03g04680 | Os03g0140400 | SD37, OsCYP96B4, CYP96B4, CYP96B4/SD37, OsDSS1, DSS1 | Detail |
| CX3g025906 | 3:2,014,046-2,014,475 | - | - | - | - | - | - | Detail |
| CX3g029016 | 3:2,016,362-2,018,398 | - | C1H3g07260 | C2H3g12329 | LOC_Os03g16950 | Os03g0140500 | - | Detail |
| CX3g029520 | 3:2,022,391-2,022,693 | + | - | - | - | - | - | Detail |
| CX3g026380 | 3:2,024,805-2,025,248 | - | C1H3g31769 | C2H3g13203 | - | Os03g0140650 | - | Detail |
| CX3g028112 | 3:2,028,126-2,029,382 | + | C1H3g10738 | C2H3g17473 | LOC_Os03g04710 | Os03g0140700 | - | Detail |
| CX3g026099 | 3:2,030,425-2,030,583 | - | - | - | - | Os07g0616100 | - | Detail |
| CX3g026550 | 3:2,031,918-2,032,091 | - | - | - | - | - | - | Detail |