| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g15230 | 5:23,167,027-23,168,937 | + | - | - | - | - | - | Detail |
| C2H5g04318 | 5:23,171,248-23,173,305 | + | C1H5g03876 | CX5g037582 | LOC_Os05g48320 | Os05g0557000 | - | Detail |
| C2H5g27989 | 5:23,173,820-23,177,222 | - | C1H5g30394 | CX5g039564 | LOC_Os05g48330 | Os05g0557100 | - | Detail |
| C2H5g12748 | 5:23,183,844-23,189,167 | + | C1H5g07029 | CX5g039452 | LOC_Os05g48340 | Os05g0557200 | - | Detail |
| C2H5g05831 | 5:23,191,712-23,195,067 | - | C1H5g15077 | CX5g040314 | LOC_Os05g48360 | Os05g0557400 | - | Detail |
| C2H5g12137 | 5:23,196,911-23,199,613 | - | C1H5g30428 | CX5g038427 | LOC_Os05g48370 | Os05g0557500 | - | Detail |
| C2H5g10055 | 5:23,200,501-23,204,959 | - | C1H5g24254 | CX5g039930 | LOC_Os05g48380 | Os05g0557600 | - | Detail |
| C2H5g25746 | 5:23,206,512-23,214,667 | - | C1H5g01069 | CX5g041031 | LOC_Os05g48390 | Os05g0557700 | LTN1, PHO2.2 | Detail |
| C2H5g26773 | 5:23,222,969-23,225,459 | - | C1H5g26384 | CX5g036872 | LOC_Os05g48410 | Os05g0557800 | - | Detail |
| C2H5g03768 | 5:23,226,059-23,229,161 | - | C1H5g08534 | CX5g040711 | LOC_Os05g48416 | Os05g0557900 | - | Detail |
| C2H5g19124 | 5:23,230,795-23,232,045 | - | C1H5g13071 | CX5g037638 | LOC_Os05g48422 | Os05g0558000 | - | Detail |
| C2H5g11101 | 5:23,243,006-23,243,791 | - | C1H5g24420 | CX5g040952 | LOC_Os05g48489 | Os05g0457800 | - | Detail |
| C2H5g00508 | 5:23,244,106-23,250,113 | + | C1H5g06098 | CX5g037184 | LOC_Os05g48450 | Os05g0558400 | OsBCAT4 | Detail |
| C2H5g28108 | 5:23,255,492-23,255,881 | - | C1H5g05403 | CX9g057071 | LOC_Os05g48480 | Os05g0353100 | - | Detail |
| C2H5g13714 | 5:23,258,767-23,263,640 | + | C1H5g08257 | CX5g039815 | LOC_Os05g48500 | Os05g0558800 | - | Detail |
| C2H5g18563 | 5:23,266,183-23,272,680 | + | C1H5g19475 | CX5g038975 | LOC_Os05g48510 | Os05g0558900 | - | Detail |
| C2H5g19891 | 5:23,272,885-23,274,753 | - | C1H5g12218 | CX5g038139 | LOC_Os05g48520 | Os05g0559000 | - | Detail |
| C2H5g17680 | 5:23,288,779-23,289,265 | - | C1H5g10473 | CX5g039256 | LOC_Os05g48570 | Os05g0559316 | - | Detail |
| C2H5g06270 | 5:23,294,102-23,295,184 | - | C1H5g08715 | CX5g038826 | LOC_Os05g48580 | Os05g0559350 | - | Detail |
| C2H5g14650 | 5:23,300,524-23,304,607 | - | C1H5g27784 | CX5g039828 | LOC_Os05g48590 | Os05g0559400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025982 | 3:1,900,714-1,904,222 | + | C1H3g12595 | C2H3g19333 | LOC_Os03g04500 | Os03g0138000 | - | Detail |
| CX3g027153 | 3:1,906,424-1,913,688 | - | - | - | LOC_Os03g04520 | Os03g0138100 | - | Detail |
| CX3g028238 | 3:1,918,113-1,919,681 | + | C1H3g03175 | C2H3g18481 | LOC_Os03g04530 | Os03g0138200 | - | Detail |
| CX3g028187 | 3:1,922,527-1,922,799 | + | C1H3g14282 | C2H3g15460 | LOC_Os03g04545 | Os03g0138400 | - | Detail |
| CX3g026784 | 3:1,928,068-1,929,577 | + | C1H3g10085 | C2H3g21651 | LOC_Os03g04550 | Os03g0138500 | - | Detail |
| CX3g030039 | 3:1,930,264-1,933,737 | - | C1H3g00368 | C2H3g00575 | LOC_Os03g04560 | Os03g0138600 | - | Detail |
| CX3g028744 | 3:1,936,705-1,941,027 | - | C1H3g01644 | C2H3g22416 | LOC_Os03g04570 | Os03g0138700 | OsPTR1 | Detail |
| CX3g028323 | 3:1,943,894-1,944,877 | + | C1H3g14228 | C2H3g08919 | LOC_Os03g04580 | Os03g0138900 | - | Detail |
| CX3g027627 | 3:1,946,622-1,948,947 | + | C1H3g13763 | C2H3g29903 | LOC_Os03g04590 | Os03g0139100 | - | Detail |
| CX3g030974 | 3:1,949,805-1,955,095 | - | C1H3g21758 | C2H3g28589 | LOC_Os03g04600 | Os03g0139200 | - | Detail |
| CX3g025022 | 3:1,958,278-1,959,243 | + | C1H3g05378 | C2H3g22571 | LOC_Os03g04610 | Os03g0139400 | - | Detail |
| CX3g025825 | 3:1,960,889-1,964,535 | - | C1H3g00456 | C2H3g01677 | LOC_Os03g04620 | Os03g0139500 | - | Detail |
| CX3g025500 | 3:2,011,751-2,013,370 | + | C1H3g15064 | C2H3g29153 | LOC_Os03g04680 | Os03g0140400 | SD37, OsCYP96B4, CYP96B4, CYP96B4/SD37, OsDSS1, DSS1 | Detail |
| CX3g025906 | 3:2,014,046-2,014,475 | - | - | - | - | - | - | Detail |
| CX3g029016 | 3:2,016,362-2,018,398 | - | C1H3g07260 | C2H3g12329 | LOC_Os03g16950 | Os03g0140500 | - | Detail |
| CX3g029520 | 3:2,022,391-2,022,693 | + | - | - | - | - | - | Detail |
| CX3g026380 | 3:2,024,805-2,025,248 | - | C1H3g31769 | C2H3g13203 | - | Os03g0140650 | - | Detail |
| CX3g028112 | 3:2,028,126-2,029,382 | + | C1H3g10738 | C2H3g17473 | LOC_Os03g04710 | Os03g0140700 | - | Detail |
| CX3g026099 | 3:2,030,425-2,030,583 | - | - | - | - | Os07g0616100 | - | Detail |
| CX3g026550 | 3:2,031,918-2,032,091 | - | - | - | - | - | - | Detail |