| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03007 | 6:991,070-996,326 | + | C1H6g21402 | CX6g042396 | LOC_Os06g03800 | Os06g0128600 | - | Detail |
| C2H6g15041 | 6:998,362-999,039 | - | C1H6g22896 | CX6g043598 | LOC_Os06g03810 | Os06g0128800 | ROD1 | Detail |
| C2H6g15913 | 6:1,002,336-1,005,563 | + | - | CX6g043137 | LOC_Os06g03820 | Os06g0129000 | - | Detail |
| C2H6g21739 | 6:1,010,338-1,013,257 | + | C1H6g24553 | CX6g043087 | LOC_Os06g03830 | Os06g0129100 | - | Detail |
| C2H6g00876 | 6:1,015,118-1,016,419 | - | - | CX6g042312 | LOC_Os06g03840 | Os06g0129200 | - | Detail |
| C2H6g06428 | 6:1,018,526-1,021,414 | - | C1H6g11331 | CX6g041241 | LOC_Os06g03850 | Os06g0129300 | - | Detail |
| C2H6g25282 | 6:1,025,384-1,032,007 | + | C1H6g29259 | CX6g042701 | LOC_Os06g03860 | Os06g0129400 | OsSPX-MFS3 | Detail |
| C2H6g21225 | 6:1,036,037-1,038,517 | - | C1H6g00193 | CX6g043110 | LOC_Os06g03910 | Os06g0129700 | OsNUDX14 | Detail |
| C2H6g26298 | 6:1,040,115-1,041,676 | + | C1H6g17530 | CX6g045939 | LOC_Os06g03920 | Os06g0129800 | - | Detail |
| C2H6g20963 | 6:1,041,832-1,045,573 | - | C1H6g17973 | CX6g041936 | LOC_Os06g03930 | Os06g0129900 | - | Detail |
| C2H6g21946 | 6:1,047,999-1,055,626 | + | C1H6g16816 | CX6g042961 | LOC_Os06g03940 | Os06g0130000 | - | Detail |
| C2H6g29452 | 6:1,068,622-1,076,045 | + | C1H6g10621 | CX6g045059 | LOC_Os06g03970 | Os06g0130100 | - | Detail |
| C2H6g19930 | 6:1,077,962-1,083,480 | - | C1H6g10956 | CX6g044073 | LOC_Os06g03980 | Os06g0130200 | - | Detail |
| C2H6g06199 | 6:1,093,955-1,097,863 | + | C1H6g25934 | CX6g042850 | LOC_Os06g03990 | Os06g0130400 | SSG6, OsACS6 | Detail |
| C2H6g01425 | 6:1,098,428-1,098,999 | + | C1H6g22047 | CX6g045112 | LOC_Os06g04000 | Os06g0130500 | - | Detail |
| C2H6g10031 | 6:1,099,759-1,104,110 | - | C1H6g20077 | CX6g044708 | LOC_Os06g04010 | Os06g0130600 | OsGBP1 | Detail |
| C2H6g17502 | 6:1,105,721-1,107,104 | - | C1H6g17787 | CX6g044104 | LOC_Os06g04020 | Os06g0130800 | - | Detail |
| C2H6g03952 | 6:1,108,573-1,109,466 | - | C1H6g00179 | CX6g042400 | LOC_Os06g04030 | Os06g0130900 | - | Detail |
| C2H6g02995 | 6:1,111,833-1,117,107 | + | C1H6g27483 | CX6g044062 | LOC_Os06g04040 | Os06g0131100 | - | Detail |
| C2H6g25218 | 6:1,134,720-1,136,828 | - | - | CX6g045583 | LOC_Os06g04070 | Os06g0131300 | ADC1, OsADC1, ARGDC, ADC, OsAdc1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027728 | 3:1,758,605-1,759,731 | - | C1H3g16924 | C2H3g04770 | LOC_Os03g04220 | Os03g0134900 | - | Detail |
| CX3g030799 | 3:1,773,686-1,776,211 | - | C1H3g07565 | C2H3g10421 | LOC_Os03g04270 | Os03g0135400 | - | Detail |
| CX3g027511 | 3:1,781,948-1,782,169 | + | - | - | - | Os03g0135550 | - | Detail |
| CX3g031179 | 3:1,783,426-1,783,599 | + | - | - | - | - | - | Detail |
| CX3g025620 | 3:1,787,958-1,790,688 | - | C1H3g05387 | C2H3g21011 | LOC_Os03g04300 | Os03g0135600 | - | Detail |
| CX3g028533 | 3:1,795,096-1,796,703 | - | C1H3g28124 | C2H3g13535 | LOC_Os03g04310 | Os03g0135700 | - | Detail |
| CX3g025482 | 3:1,802,095-1,802,337 | + | - | - | - | - | - | Detail |
| CX3g028470 | 3:1,813,824-1,814,915 | + | C1H3g26367 | C2H3g08967 | LOC_Os03g04340 | Os03g0136200 | - | Detail |
| CX3g025886 | 3:1,821,864-1,823,444 | - | C1H3g15385 | C2H3g15188 | LOC_Os03g04360 | Os03g0136400 | OsPHT1;7 | Detail |
| CX3g030982 | 3:1,824,986-1,825,468 | + | C1H3g07268 | C2H3g18976 | LOC_Os03g04380 | Os03g0136600 | - | Detail |
| CX3g031134 | 3:1,826,034-1,828,382 | - | C1H3g01856 | C2H3g17961 | LOC_Os03g04390 | Os03g0136700 | OsPGL3A | Detail |
| CX3g026091 | 3:1,829,450-1,832,363 | - | C1H3g19390 | C2H3g24395 | LOC_Os03g04400 | Os03g0136800 | - | Detail |
| CX3g026194 | 3:1,833,903-1,840,298 | - | C1H3g26141 | C2H3g13274 | LOC_Os03g04410 | Os03g0136900 | - | Detail |
| CX3g025161 | 3:1,856,768-1,859,033 | + | C1H3g09324 | C2H3g10382 | LOC_Os03g04430 | Os03g0137200 | - | Detail |
| CX3g030835 | 3:1,860,399-1,863,559 | - | C1H3g24578 | C2H3g08269 | LOC_Os03g04440 | Os03g0137300 | - | Detail |
| CX3g030190 | 3:1,865,997-1,873,889 | + | C1H3g23115 | C2H3g22036 | LOC_Os03g04450 | Os03g0137400 | - | Detail |
| CX3g030394 | 3:1,874,828-1,875,978 | + | C1H3g17292 | C2H3g01834 | LOC_Os03g04470 | Os03g0137600 | - | Detail |
| CX3g026460 | 3:1,877,438-1,879,310 | - | C1H3g01548 | C2H3g03162 | LOC_Os03g04480 | Os03g0137700 | - | Detail |
| CX3g029178 | 3:1,890,045-1,892,963 | + | C1H3g28742 | C2H3g00922 | LOC_Os03g04490 | Os03g0137800 | KRP5 | Detail |
| CX3g025834 | 3:1,898,070-1,898,264 | - | - | - | - | - | - | Detail |