| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09802 | 1:27,367,711-27,375,588 | + | C2H1g19534 | CX1g004251 | LOC_Os01g53294 | Os01g0734200 | OsRbohA, OsNOX2 | Detail |
| C1H1g03864 | 1:27,377,917-27,378,810 | - | - | CX1g001402 | - | - | - | Detail |
| C1H1g16727 | 1:27,390,048-27,391,484 | + | C2H1g09241 | CX1g003337 | LOC_Os01g53350 | Os01g0734800 | - | Detail |
| C1H1g17596 | 1:27,402,036-27,403,511 | + | C2H1g27577 | CX1g000021 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| C1H1g12410 | 1:27,423,630-27,425,060 | - | C2H1g28000 | CX1g004334 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| C1H1g11199 | 1:27,430,155-27,431,579 | - | C2H1g03039 | CX1g005230 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| C1H1g10989 | 1:27,439,124-27,440,539 | - | C2H1g19693 | CX1g005230 | LOC_Os01g53460 | Os01g0736300 | OsUGT706D1 | Detail |
| C1H1g04228 | 1:27,440,820-27,444,367 | + | C2H1g23129 | CX1g005942 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| C1H1g11257 | 1:27,445,725-27,446,477 | + | C2H1g09664 | CX1g003434 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| C1H1g18188 | 1:27,461,175-27,463,166 | + | C2H1g22559 | CX1g003962 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| C1H1g17501 | 1:27,473,848-27,479,224 | + | C2H1g29848 | CX1g006682 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| C1H1g26053 | 1:27,485,298-27,487,538 | + | C2H1g23141 | CX1g007234 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| C1H1g28789 | 1:27,493,976-27,494,602 | + | C2H1g28481 | CX1g001301 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| C1H1g20246 | 1:27,496,365-27,500,643 | - | C2H1g06822 | CX1g004371 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| C1H1g10368 | 1:27,500,714-27,504,048 | + | C2H1g22933 | CX1g003960 | LOC_Os01g53610 | Os01g0737900 | DYW3 | Detail |
| C1H1g29380 | 1:27,505,981-27,507,556 | + | C2H1g30197 | CX1g007226 | LOC_Os01g53620 | Os01g0738000 | - | Detail |
| C1H1g12561 | 1:27,508,849-27,516,184 | - | C2H1g26273 | CX1g002866 | LOC_Os01g53630 | Os01g0738100 | - | Detail |
| C1H1g20235 | 1:27,533,651-27,540,451 | + | C2H1g06044 | CX1g000101 | LOC_Os01g53640 | Os01g0738300 | - | Detail |
| C1H1g20301 | 1:27,548,869-27,552,506 | + | C2H1g19036 | CX1g001943 | LOC_Os01g53660 | Os01g0738500 | - | Detail |
| C1H1g10504 | 1:27,553,198-27,556,755 | + | C2H1g22385 | CX1g000533 | LOC_Os01g53670 | Os01g0738600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027728 | 3:1,758,605-1,759,731 | - | C1H3g16924 | C2H3g04770 | LOC_Os03g04220 | Os03g0134900 | - | Detail |
| CX3g030799 | 3:1,773,686-1,776,211 | - | C1H3g07565 | C2H3g10421 | LOC_Os03g04270 | Os03g0135400 | - | Detail |
| CX3g027511 | 3:1,781,948-1,782,169 | + | - | - | - | Os03g0135550 | - | Detail |
| CX3g031179 | 3:1,783,426-1,783,599 | + | - | - | - | - | - | Detail |
| CX3g025620 | 3:1,787,958-1,790,688 | - | C1H3g05387 | C2H3g21011 | LOC_Os03g04300 | Os03g0135600 | - | Detail |
| CX3g028533 | 3:1,795,096-1,796,703 | - | C1H3g28124 | C2H3g13535 | LOC_Os03g04310 | Os03g0135700 | - | Detail |
| CX3g025482 | 3:1,802,095-1,802,337 | + | - | - | - | - | - | Detail |
| CX3g028470 | 3:1,813,824-1,814,915 | + | C1H3g26367 | C2H3g08967 | LOC_Os03g04340 | Os03g0136200 | - | Detail |
| CX3g025886 | 3:1,821,864-1,823,444 | - | C1H3g15385 | C2H3g15188 | LOC_Os03g04360 | Os03g0136400 | OsPHT1;7 | Detail |
| CX3g030982 | 3:1,824,986-1,825,468 | + | C1H3g07268 | C2H3g18976 | LOC_Os03g04380 | Os03g0136600 | - | Detail |
| CX3g031134 | 3:1,826,034-1,828,382 | - | C1H3g01856 | C2H3g17961 | LOC_Os03g04390 | Os03g0136700 | OsPGL3A | Detail |
| CX3g026091 | 3:1,829,450-1,832,363 | - | C1H3g19390 | C2H3g24395 | LOC_Os03g04400 | Os03g0136800 | - | Detail |
| CX3g026194 | 3:1,833,903-1,840,298 | - | C1H3g26141 | C2H3g13274 | LOC_Os03g04410 | Os03g0136900 | - | Detail |
| CX3g025161 | 3:1,856,768-1,859,033 | + | C1H3g09324 | C2H3g10382 | LOC_Os03g04430 | Os03g0137200 | - | Detail |
| CX3g030835 | 3:1,860,399-1,863,559 | - | C1H3g24578 | C2H3g08269 | LOC_Os03g04440 | Os03g0137300 | - | Detail |
| CX3g030190 | 3:1,865,997-1,873,889 | + | C1H3g23115 | C2H3g22036 | LOC_Os03g04450 | Os03g0137400 | - | Detail |
| CX3g030394 | 3:1,874,828-1,875,978 | + | C1H3g17292 | C2H3g01834 | LOC_Os03g04470 | Os03g0137600 | - | Detail |
| CX3g026460 | 3:1,877,438-1,879,310 | - | C1H3g01548 | C2H3g03162 | LOC_Os03g04480 | Os03g0137700 | - | Detail |
| CX3g029178 | 3:1,890,045-1,892,963 | + | C1H3g28742 | C2H3g00922 | LOC_Os03g04490 | Os03g0137800 | KRP5 | Detail |
| CX3g025834 | 3:1,898,070-1,898,264 | - | - | - | - | - | - | Detail |