| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g05837 | 1:34,814,284-34,817,813 | - | C1H1g03400 | CX1g004760 | LOC_Os01g67770 | Os01g0904700 | RR26, OsRR26, Rrb6, Orr6, OsRR16, OsRRB6 | Detail |
| C2H1g29165 | 1:34,830,200-34,832,407 | + | C1H1g01129 | CX1g000275 | LOC_Os01g67810 | Os01g0905200 | - | Detail |
| C2H1g16521 | 1:34,833,811-34,835,983 | + | C1H1g31042 | CX1g001652 | LOC_Os01g67820 | Os01g0905300 | - | Detail |
| C2H1g29056 | 1:34,837,704-34,841,038 | - | C1H1g11384 | CX1g000161 | LOC_Os01g67830 | Os01g0905400 | - | Detail |
| C2H1g13823 | 1:34,849,593-34,852,389 | + | C1H1g03018 | CX1g004783 | LOC_Os01g67850 | Os01g0905700 | - | Detail |
| C2H1g10330 | 1:34,853,768-34,856,107 | - | C1H1g11811 | CX1g001709 | LOC_Os01g67860 | Os01g0905800 | - | Detail |
| C2H1g06722 | 1:34,859,001-34,864,128 | - | C1H1g06073 | CX1g001709 | LOC_Os01g67870 | Os01g0906000 | - | Detail |
| C2H1g09299 | 1:34,868,161-34,877,076 | - | C1H1g19357 | CX1g002463 | LOC_Os01g67880 | Os01g0906200 | - | Detail |
| C2H1g18200 | 1:34,880,705-34,886,760 | - | C1H1g19297 | CX1g003860 | LOC_Os01g67920 | Os01g0906600 | - | Detail |
| C2H1g20697 | 1:34,889,896-34,890,684 | + | C1H1g12726 | CX1g003493 | LOC_Os01g67950 | Os01g0907200 | - | Detail |
| C2H1g10610 | 1:34,893,569-34,898,685 | + | C1H1g26541 | CX1g004144 | LOC_Os01g67960 | Os01g0907300 | - | Detail |
| C2H1g19705 | 1:34,899,270-34,906,295 | + | C1H1g18538 | CX1g000822 | LOC_Os01g67970 | Os01g0907400 | JMJ705 | Detail |
| C2H1g19503 | 1:34,924,288-34,927,881 | + | C1H1g08768 | CX1g000912 | LOC_Os01g68000 | Os01g0907900 | PLA2, pla2, pla2(pla2-1, pla2-2), plt2, LHD2 | Detail |
| C2H1g14371 | 1:34,938,471-34,941,205 | - | C1H1g13810 | CX1g000788 | LOC_Os01g68010 | Os01g0908100 | - | Detail |
| C2H1g27794 | 1:34,944,440-34,948,560 | + | C1H1g00934 | CX1g002877 | LOC_Os01g68020 | Os01g0908200 | OsBT | Detail |
| C2H1g06918 | 1:34,949,685-34,950,957 | - | C1H1g26380 | CX1g005492 | LOC_Os01g68030 | Os01g0908400 | - | Detail |
| C2H1g30537 | 1:34,952,240-34,955,472 | - | C1H1g26157 | CX1g002681 | LOC_Os01g68040 | Os01g0908500 | - | Detail |
| C2H1g27819 | 1:34,962,221-34,964,922 | + | C1H1g02663 | CX1g003019 | LOC_Os01g68050 | Os01g0908600 | OsProT1 | Detail |
| C2H1g20684 | 1:34,965,284-34,969,654 | - | C1H1g28238 | CX1g003471 | LOC_Os01g68060 | Os01g0908700 | - | Detail |
| C2H1g29519 | 1:34,987,052-34,990,279 | + | C1H1g09218 | CX1g001897 | LOC_Os01g68104 | Os01g0909100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026513 | 3:1,651,067-1,654,452 | + | C1H3g06072 | C2H3g11143 | LOC_Os03g04000 | Os03g0132000 | - | Detail |
| CX3g026620 | 3:1,662,771-1,664,346 | + | C1H3g07116 | C2H3g03337 | LOC_Os03g04020 | Os03g0132200 | - | Detail |
| CX3g028694 | 3:1,668,724-1,671,495 | - | C1H3g18409 | C2H3g07678 | LOC_Os03g04030 | Os03g0132300 | - | Detail |
| CX3g027857 | 3:1,676,424-1,677,413 | + | - | - | LOC_Os03g04040 | - | - | Detail |
| CX3g027082 | 3:1,680,417-1,680,629 | - | - | - | - | - | - | Detail |
| CX3g030334 | 3:1,687,195-1,691,629 | + | C1H3g11603 | C2H3g02332 | LOC_Os03g04050 | Os03g0132800 | OsBSK1-1 | Detail |
| CX3g025735 | 3:1,693,693-1,693,905 | - | - | - | - | - | - | Detail |
| CX3g028275 | 3:1,694,371-1,695,354 | + | C1H3g08655 | - | LOC_Os03g04060 | Os03g0132900 | - | Detail |
| CX3g030345 | 3:1,696,416-1,697,942 | - | C1H3g17948 | C2H3g25865 | LOC_Os03g04070 | Os03g0133000 | NAC22, ONAC022 | Detail |
| CX3g030686 | 3:1,705,179-1,705,526 | + | C1H3g06331 | C2H3g07517 | LOC_Os03g04080 | Os03g0133100 | - | Detail |
| CX3g026302 | 3:1,706,254-1,709,748 | - | C1H3g07259 | - | - | - | - | Detail |
| CX3g029725 | 3:1,710,025-1,714,208 | + | C1H3g25947 | C2H3g25074 | LOC_Os03g04100 | Os03g0133300 | ESV1, Os-ESV1, LA3 | Detail |
| CX3g025596 | 3:1,715,076-1,715,768 | + | C1H3g11058 | C2H3g16071 | LOC_Os03g04110 | Os03g0133400 | CEBiP, OsCEBiP | Detail |
| CX3g031140 | 3:1,718,761-1,720,419 | - | C1H3g20995 | C2H3g08230 | LOC_Os03g04120 | Os03g0133500 | - | Detail |
| CX3g028134 | 3:1,722,361-1,725,063 | - | C1H3g14010 | C2H3g28117 | LOC_Os03g04130 | Os03g0133800 | - | Detail |
| CX3g028998 | 3:1,731,283-1,735,165 | - | C1H3g28278 | C2H3g18012 | LOC_Os03g04140 | Os03g0133900 | OsSAT3 | Detail |
| CX3g030226 | 3:1,738,640-1,742,532 | + | C1H3g03246 | C2H3g09036 | LOC_Os03g04169 | Os03g0134300 | - | Detail |
| CX3g030747 | 3:1,743,580-1,745,560 | - | C1H3g21430 | C2H3g27438 | LOC_Os03g04190 | Os03g0134500 | - | Detail |
| CX3g028092 | 3:1,755,176-1,755,601 | + | C1H3g13462 | C2H3g10429 | - | - | - | Detail |
| CX3g028352 | 3:1,756,818-1,757,814 | + | C1H3g21849 | C2H3g12826 | LOC_Os03g04210 | Os03g0134800 | - | Detail |