| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g17442 | 2:18,422,524-18,423,238 | - | C1H2g29093 | CX2g019839 | LOC_Os02g32580 | Os02g0527200 | - | Detail |
| C2H2g30266 | 2:18,428,074-18,431,227 | - | C1H2g07585 | CX2g022921 | LOC_Os02g32590 | Os02g0527300 | - | Detail |
| C2H2g23334 | 2:18,450,154-18,456,741 | - | C1H2g23562 | CX2g019234 | LOC_Os02g32610 | Os02g0527600 | OsCTR2 | Detail |
| C2H2g00546 | 2:18,457,858-18,459,252 | - | C1H2g04626 | CX2g022229 | - | Os02g0204700 | - | Detail |
| C2H2g10408 | 2:18,468,267-18,470,474 | - | C1H2g07463 | - | - | - | - | Detail |
| C2H2g01475 | 2:18,475,392-18,479,377 | - | C1H2g27676 | CX2g023161 | LOC_Os02g33720 | Os02g0528000 | - | Detail |
| C2H2g30277 | 2:18,481,189-18,483,386 | - | C1H2g02493 | CX2g019088 | LOC_Os02g32650 | Os02g0528100 | - | Detail |
| C2H2g20323 | 2:18,485,079-18,498,127 | - | C1H2g15691 | CX2g022806 | LOC_Os02g32660 | Os02g0528200 | SBE3, SBEIII*, SBEIII, Sbe3, RBE3, QEIIa, QEIIA, BEIIb, BEIIB, SBEIIb, OsBEIIb, sbe3, SBE III | Detail |
| C2H2g15285 | 2:18,508,480-18,520,543 | - | C1H2g29366 | CX2g020306 | LOC_Os02g32690 | Os02g0528900 | - | Detail |
| C2H2g20296 | 2:18,521,354-18,525,604 | - | C1H2g11870 | CX2g020568 | LOC_Os02g25600 | Os01g0134200 | - | Detail |
| C2H2g10414 | 2:18,537,876-18,542,501 | + | C1H2g00920 | CX2g022433 | LOC_Os02g32730 | Os02g0529400 | - | Detail |
| C2H2g18145 | 2:18,544,234-18,545,939 | + | C1H2g24766 | CX2g020157 | LOC_Os02g32740 | Os02g0529500 | - | Detail |
| C2H2g17400 | 2:18,555,495-18,556,987 | - | C1H2g22581 | CX2g023637 | LOC_Os02g32760 | Os02g0529700 | - | Detail |
| C2H2g26264 | 2:18,558,526-18,562,569 | - | C1H2g07352 | CX2g021706 | LOC_Os02g32770 | Os02g0529800 | - | Detail |
| C2H2g27061 | 2:18,573,076-18,574,369 | - | C1H2g17686 | CX2g021636 | LOC_Os02g32814 | Os02g0530100 | - | Detail |
| C2H2g20227 | 2:18,576,176-18,580,750 | + | C1H2g28782 | - | - | - | - | Detail |
| C2H2g28791 | 2:18,605,539-18,605,808 | + | C1H2g03635 | CX2g021909 | LOC_Os02g32850 | Os02g0530500 | - | Detail |
| C2H2g06644 | 2:18,610,359-18,615,965 | - | C1H2g17644 | CX2g021102 | LOC_Os02g32860 | Os02g0530600 | - | Detail |
| C2H2g13474 | 2:18,621,434-18,629,042 | + | C1H2g20262 | CX2g023644 | LOC_Os02g32930 | Os02g0531200 | - | Detail |
| C2H2g09518 | 2:18,638,699-18,639,867 | - | C1H2g17709 | CX2g023678 | LOC_Os02g32950 | Os02g0531600 | RCN2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030654 | 3:1,528,372-1,528,707 | - | C1H3g30382 | C2H3g05832 | LOC_Os03g03770 | Os03g0129900 | - | Detail |
| CX3g031051 | 3:1,533,755-1,534,012 | + | - | - | - | Os03g0606466 | - | Detail |
| CX3g028774 | 3:1,547,154-1,549,021 | + | C1H3g27546 | C2H3g07821 | LOC_Os03g03790 | Os03g0130100 | OsCNL1 | Detail |
| CX3g030766 | 3:1,552,148-1,552,873 | + | C1H3g09567 | C2H3g09589 | LOC_Os03g22700 | - | - | Detail |
| CX3g027416 | 3:1,555,191-1,555,545 | + | C1H3g01006 | C2H3g10593 | LOC_Os03g03810 | Os03g0130300 | OsDEF8 | Detail |
| CX3g029936 | 3:1,556,890-1,559,808 | + | C1H3g27010 | C2H3g18638 | LOC_Os03g03820 | Os03g0130400 | - | Detail |
| CX3g030536 | 3:1,560,839-1,568,258 | - | C1H3g11205 | C2H3g06449 | LOC_Os03g03830 | Os03g0130500 | - | Detail |
| CX3g025772 | 3:1,570,657-1,571,469 | - | C1H3g22820 | C2H3g11440 | LOC_Os03g03850 | Os03g0831200 | GATA12 | Detail |
| CX3g029509 | 3:1,572,529-1,576,196 | - | C1H3g17616 | C2H3g20859 | LOC_Os03g03860 | Os03g0130700 | - | Detail |
| CX3g029309 | 3:1,581,152-1,583,482 | - | C1H3g26036 | C2H3g08783 | - | Os03g0130750 | - | Detail |
| CX3g026936 | 3:1,585,705-1,591,107 | + | C1H3g08344 | C2H3g05534 | LOC_Os03g03870 | Os03g0130800 | - | Detail |
| CX3g028472 | 3:1,600,055-1,606,155 | + | C1H3g09568 | C2H3g28810 | LOC_Os03g03880 | Os03g0130900 | - | Detail |
| CX3g030865 | 3:1,608,020-1,610,303 | + | C1H3g20543 | C2H3g29451 | LOC_Os03g03890 | Os03g0131000 | - | Detail |
| CX3g029241 | 3:1,611,897-1,615,429 | - | C1H3g20869 | C2H3g00921 | LOC_Os03g03900 | Os03g0131100 | OsNLP1 | Detail |
| CX3g027343 | 3:1,623,829-1,632,908 | - | C1H3g21207 | C2H3g05397 | LOC_Os03g03910 | Os03g0131200 | - | Detail |
| CX3g029745 | 3:1,634,970-1,640,103 | - | C1H3g04201 | C2H3g07948 | LOC_Os03g03930 | Os03g0131400 | - | Detail |
| CX3g026999 | 3:1,640,341-1,642,905 | + | C1H3g28233 | C2H3g06029 | LOC_Os03g03949 | Os03g0131500 | - | Detail |
| CX3g028529 | 3:1,644,171-1,645,227 | + | C1H3g02854 | C2H3g05494 | LOC_Os03g03980 | Os03g0131800 | - | Detail |
| CX3g029556 | 3:1,646,374-1,647,540 | - | C1H3g31581 | C2H3g22495 | LOC_Os03g03990 | Os03g0131900 | OscpSRP43, cpSRP43 | Detail |
| CX3g025883 | 3:1,649,041-1,649,292 | - | - | - | - | - | - | Detail |