| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g01922 | 3:26,743,428-26,745,653 | - | C2H3g11307 | CX3g030763 | LOC_Os03g50090 | Os03g0708600 | - | Detail |
| C1H3g14178 | 3:26,746,986-26,752,073 | - | C2H3g20554 | CX3g025191 | LOC_Os03g50100 | Os03g0708700 | - | Detail |
| C1H3g04028 | 3:26,761,227-26,762,360 | - | C2H3g02008 | CX3g026061 | LOC_Os03g50110 | Os03g0708800 | - | Detail |
| C1H3g25650 | 3:26,764,606-26,768,838 | + | C2H3g01107 | CX3g026724 | LOC_Os03g50120 | Os03g0708900 | - | Detail |
| C1H3g26419 | 3:26,770,835-26,772,770 | - | C2H3g12581 | CX3g026549 | - | Os03g0709000 | - | Detail |
| C1H3g00554 | 3:26,774,735-26,774,941 | - | C2H3g23367 | CX3g030849 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| C1H3g08833 | 3:26,775,033-26,775,239 | - | C2H3g12217 | CX3g030849 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| C1H3g00862 | 3:26,780,962-26,782,749 | - | C2H3g17990 | CX3g027687 | LOC_Os03g50160 | Os03g0709300 | - | Detail |
| C1H3g26800 | 3:26,804,791-26,806,092 | + | C2H3g22762 | CX3g031286 | LOC_Os03g50210 | Os03g0710000 | - | Detail |
| C1H3g31046 | 3:26,806,597-26,809,136 | - | C2H3g19621 | CX3g026541 | LOC_Os03g50220 | - | - | Detail |
| C1H3g04126 | 3:26,810,173-26,810,750 | - | C2H3g18554 | CX3g026477 | LOC_Os12g44330 | Os03g0789000 | OsCPK11 | Detail |
| C1H3g07148 | 3:26,814,366-26,815,461 | - | C2H3g09223 | CX3g026477 | LOC_Os03g50230 | Os03g0710100 | OsHOP2 | Detail |
| C1H3g05875 | 3:26,817,837-26,820,565 | + | C2H3g20376 | CX3g028078 | LOC_Os03g50250 | Os03g0710500 | - | Detail |
| C1H3g17966 | 3:26,824,271-26,825,550 | - | C2H3g06541 | CX3g029323 | LOC_Os03g50270 | Os03g0710600 | - | Detail |
| C1H3g12018 | 3:26,828,078-26,830,494 | - | C2H3g00310 | CX3g027946 | LOC_Os03g50280 | Os03g0710700 | - | Detail |
| C1H3g30860 | 3:26,837,279-26,841,045 | + | C2H3g13816 | CX3g029821 | LOC_Os03g50290 | Os03g0710800 | GF14f, SR14-3-3 | Detail |
| C1H3g01378 | 3:26,844,719-26,852,846 | + | C2H3g13830 | CX3g029660 | LOC_Os03g50300 | Os03g0710900 | - | Detail |
| C1H3g31233 | 3:26,858,798-26,861,216 | + | C2H3g07676 | CX3g028553 | LOC_Os03g50310 | Os03g0711100 | OsCOL10, OsBBX10, OsJ, OsCCT14 | Detail |
| C1H3g26509 | 3:26,861,572-26,876,891 | - | C2H3g02097 | CX3g031158 | LOC_Os03g50320 | Os03g0711200 | - | Detail |
| C1H3g08523 | 3:26,878,922-26,886,708 | - | C2H3g27257 | CX3g026863 | LOC_Os03g50330 | Os03g0711300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027525 | 3:1,274,209-1,276,913 | + | C1H3g17673 | C2H3g15732 | LOC_Os03g03400 | Os03g0125400 | - | Detail |
| CX3g029384 | 3:1,281,661-1,285,164 | + | C1H3g28194 | C2H3g14454 | LOC_Os03g03410 | Os03g0125600 | - | Detail |
| CX3g031344 | 3:1,289,626-1,292,471 | - | C1H3g27909 | C2H3g24007 | LOC_Os03g03420 | Os03g0125700 | - | Detail |
| CX3g029108 | 3:1,300,735-1,305,841 | + | C1H3g30116 | C2H3g15544 | LOC_Os03g03430 | Os03g0125800 | - | Detail |
| CX3g027007 | 3:1,307,173-1,308,735 | + | C1H3g10403 | C2H3g23265 | LOC_Os03g03440 | Os03g0125900 | - | Detail |
| CX3g030160 | 3:1,309,430-1,313,489 | - | C1H3g12126 | C2H3g03318 | LOC_Os03g03450 | Os03g0126000 | - | Detail |
| CX3g025642 | 3:1,315,912-1,316,061 | - | C1H4g20138 | - | - | - | - | Detail |
| CX3g027762 | 3:1,317,567-1,322,151 | - | C1H3g18852 | C2H3g01117 | LOC_Os03g03460 | Os03g0126100 | - | Detail |
| CX3g026825 | 3:1,324,065-1,327,500 | - | C1H3g19764 | C2H3g09637 | LOC_Os03g03470 | Os03g0126300 | - | Detail |
| CX3g030498 | 3:1,328,628-1,329,338 | - | C1H3g31582 | C2H3g01245 | LOC_Os03g03480 | Os03g0126450 | - | Detail |
| CX3g031250 | 3:1,331,933-1,332,622 | + | C1H3g28463 | C2H3g24889 | LOC_Os03g03490 | Os03g0126600 | - | Detail |
| CX3g025902 | 3:1,338,459-1,342,223 | - | C1H3g13225 | C2H3g24408 | LOC_Os03g03510 | Os03g0126800 | CIPK9 | Detail |
| CX3g027837 | 3:1,342,632-1,342,829 | + | - | - | - | - | - | Detail |
| CX3g028838 | 3:1,349,595-1,349,966 | + | - | - | - | - | - | Detail |
| CX3g025296 | 3:1,356,928-1,357,284 | - | C1H3g17944 | C2H3g27173 | LOC_Os03g03520 | Os03g0126900 | - | Detail |
| CX3g025913 | 3:1,360,039-1,361,681 | - | C1H3g26030 | C2H3g18981 | LOC_Os03g03530 | Os03g0127000 | - | Detail |
| CX3g025702 | 3:1,363,910-1,366,274 | - | C1H3g07061 | C2H3g10836 | LOC_Os03g03540 | Os03g0624600 | - | Detail |
| CX3g028284 | 3:1,368,022-1,368,213 | + | - | - | - | - | - | Detail |
| CX3g026760 | 3:1,375,586-1,375,825 | + | - | - | - | - | - | Detail |
| CX3g026687 | 3:1,384,541-1,386,930 | + | C1H3g08724 | C2H3g05840 | LOC_Os03g03550 | Os03g0127500 | - | Detail |