| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g10070 | 6:1,206,892-1,210,446 | - | C2H6g24358 | CX6g041745 | LOC_Os06g04090 | Os06g0131700 | - | Detail |
| C1H6g21299 | 6:1,232,098-1,234,449 | - | C2H6g09752 | CX6g044687 | LOC_Os06g04150 | Os06g0132400 | YGL18, ChlM | Detail |
| C1H6g23000 | 6:1,236,154-1,241,180 | - | C2H6g08599 | CX6g044041 | LOC_Os06g04169 | Os06g0132500 | OsBDG | Detail |
| C1H6g17422 | 6:1,254,523-1,257,080 | - | C2H6g25055 | CX6g045866 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| C1H6g23540 | 6:1,260,805-1,265,679 | + | C2H6g03148 | CX6g043331 | LOC_Os06g04200 | Os06g0133000 | WX1, wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI | Detail |
| C1H6g19109 | 6:1,272,128-1,273,395 | - | C2H6g23474 | - | - | Os06g0320850 | - | Detail |
| C1H6g16194 | 6:1,274,268-1,275,107 | - | - | - | - | - | - | Detail |
| C1H6g09083 | 6:1,281,026-1,281,307 | - | C2H6g03555 | CX6g042298 | LOC_Os06g04240 | Os06g0133500 | - | Detail |
| C1H6g07345 | 6:1,299,546-1,300,385 | + | C2H6g05959 | CX6g045091 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| C1H6g21882 | 6:1,301,814-1,305,405 | - | C2H6g30353 | CX6g044476 | LOC_Os06g04270 | Os06g0133800 | - | Detail |
| C1H6g02027 | 6:1,309,163-1,312,823 | + | C2H6g15004 | CX6g044113 | LOC_Os06g04280 | Os06g0133900 | EPSPS, EPSPs, OsEPSPS | Detail |
| C1H6g14754 | 6:1,313,392-1,315,091 | - | C2H6g06475 | CX6g041350 | LOC_Os06g04290 | Os06g0134000 | - | Detail |
| C1H6g07407 | 6:1,316,219-1,319,474 | - | C2H6g13486 | CX6g045804 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| C1H6g30767 | 6:1,322,518-1,324,925 | - | C2H6g29611 | CX6g042141 | LOC_Os06g04330 | Os06g0134300 | - | Detail |
| C1H6g02287 | 6:1,340,470-1,345,102 | - | C2H6g16063 | CX6g042141 | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g27088 | 6:1,345,304-1,346,406 | - | C2H6g07865 | - | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C1H6g08483 | 6:1,348,819-1,352,221 | - | C2H6g27381 | CX6g042141 | LOC_Os06g04350 | Os06g0134466 | - | Detail |
| C1H6g12134 | 6:1,353,149-1,356,053 | - | C2H6g21512 | CX6g042141 | LOC_Os06g04360 | Os06g0134500 | - | Detail |
| C1H6g22115 | 6:1,358,111-1,361,335 | + | C2H6g22079 | CX6g044169 | LOC_Os06g04370 | Os06g0134700 | - | Detail |
| C1H6g09734 | 6:1,366,419-1,369,745 | - | C2H6g05948 | CX6g042673 | LOC_Os06g04380 | Os06g0134800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026346 | 3:1,166,455-1,166,982 | - | C1H3g30817 | C2H3g16804 | - | - | - | Detail |
| CX3g031045 | 3:1,167,226-1,167,861 | + | C1H3g18665 | C2H3g16267 | - | - | - | Detail |
| CX3g030103 | 3:1,168,535-1,171,588 | + | C1H3g16789 | C2H3g19854 | LOC_Os03g03130 | Os03g0123100 | OsSCE2 | Detail |
| CX3g026041 | 3:1,172,893-1,174,351 | + | C1H3g27844 | C2H3g21601 | LOC_Os03g03140 | Os03g0123200 | - | Detail |
| CX3g029979 | 3:1,177,354-1,180,500 | + | C1H3g09795 | C2H3g04889 | LOC_Os03g03150 | Os03g0123300 | - | Detail |
| CX3g027318 | 3:1,186,241-1,186,399 | + | - | - | - | - | - | Detail |
| CX3g026340 | 3:1,190,164-1,195,173 | + | C1H3g14139 | C2H3g00396 | LOC_Os03g03164 | Os03g0123500 | HOS66, HOS66S | Detail |
| CX3g027409 | 3:1,196,481-1,199,504 | - | C1H3g07667 | C2H3g00632 | LOC_Os03g03180 | Os03g0123600 | - | Detail |
| CX3g025593 | 3:1,203,234-1,203,566 | - | C1H3g01390 | C2H3g19198 | LOC_Os11g34910 | Os11g0550300 | - | Detail |
| CX3g025457 | 3:1,207,390-1,209,184 | + | C1H3g08918 | C2H3g13822 | LOC_Os03g03200 | Os03g0123800 | - | Detail |
| CX3g029809 | 3:1,211,037-1,211,735 | + | C1H3g08025 | C2H3g17363 | LOC_Os02g13020 | - | - | Detail |
| CX3g025174 | 3:1,214,063-1,214,902 | - | - | - | - | - | - | Detail |
| CX3g025586 | 3:1,221,526-1,226,135 | + | C1H3g22053 | C2H3g11416 | LOC_Os03g03260 | Os03g0124000 | OsHB22 | Detail |
| CX3g029945 | 3:1,229,313-1,230,984 | + | C1H3g12842 | C2H3g23812 | LOC_Os03g03270 | Os03g0124100 | - | Detail |
| CX3g029915 | 3:1,232,905-1,235,586 | + | C1H3g06423 | C2H3g17495 | LOC_Os03g03280 | Os03g0124200 | - | Detail |
| CX3g026326 | 3:1,245,500-1,246,337 | + | C1H3g07613 | C2H3g24607 | LOC_Os03g03320 | Os03g0124500 | - | Detail |
| CX3g030707 | 3:1,255,915-1,258,824 | + | C1H3g04841 | C2H3g11584 | LOC_Os03g03350 | Os03g0124900 | OsPG1 | Detail |
| CX3g028338 | 3:1,259,155-1,260,530 | - | C1H3g23961 | C2H3g17248 | LOC_Os03g03360 | Os03g0125000 | - | Detail |
| CX3g029957 | 3:1,261,892-1,264,305 | - | C1H3g31110 | C2H3g15002 | LOC_Os03g03370 | Os03g0125100 | DSM2, OsBCH1, OsHYD3 | Detail |
| CX3g026725 | 3:1,269,939-1,273,195 | + | C1H3g17673 | C2H3g15732 | LOC_Os03g03390 | Os03g0125300 | - | Detail |