| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g01922 | 3:26,743,428-26,745,653 | - | C2H3g11307 | CX3g030763 | LOC_Os03g50090 | Os03g0708600 | - | Detail |
| C1H3g14178 | 3:26,746,986-26,752,073 | - | C2H3g20554 | CX3g025191 | LOC_Os03g50100 | Os03g0708700 | - | Detail |
| C1H3g04028 | 3:26,761,227-26,762,360 | - | C2H3g02008 | CX3g026061 | LOC_Os03g50110 | Os03g0708800 | - | Detail |
| C1H3g25650 | 3:26,764,606-26,768,838 | + | C2H3g01107 | CX3g026724 | LOC_Os03g50120 | Os03g0708900 | - | Detail |
| C1H3g26419 | 3:26,770,835-26,772,770 | - | C2H3g12581 | CX3g026549 | - | Os03g0709000 | - | Detail |
| C1H3g00554 | 3:26,774,735-26,774,941 | - | C2H3g23367 | CX3g030849 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| C1H3g08833 | 3:26,775,033-26,775,239 | - | C2H3g12217 | CX3g030849 | LOC_Os03g50140 | Os03g0709100 | OsUCL8 | Detail |
| C1H3g00862 | 3:26,780,962-26,782,749 | - | C2H3g17990 | CX3g027687 | LOC_Os03g50160 | Os03g0709300 | - | Detail |
| C1H3g26800 | 3:26,804,791-26,806,092 | + | C2H3g22762 | CX3g031286 | LOC_Os03g50210 | Os03g0710000 | - | Detail |
| C1H3g31046 | 3:26,806,597-26,809,136 | - | C2H3g19621 | CX3g026541 | LOC_Os03g50220 | - | - | Detail |
| C1H3g04126 | 3:26,810,173-26,810,750 | - | C2H3g18554 | CX3g026477 | LOC_Os12g44330 | Os03g0789000 | OsCPK11 | Detail |
| C1H3g07148 | 3:26,814,366-26,815,461 | - | C2H3g09223 | CX3g026477 | LOC_Os03g50230 | Os03g0710100 | OsHOP2 | Detail |
| C1H3g05875 | 3:26,817,837-26,820,565 | + | C2H3g20376 | CX3g028078 | LOC_Os03g50250 | Os03g0710500 | - | Detail |
| C1H3g17966 | 3:26,824,271-26,825,550 | - | C2H3g06541 | CX3g029323 | LOC_Os03g50270 | Os03g0710600 | - | Detail |
| C1H3g12018 | 3:26,828,078-26,830,494 | - | C2H3g00310 | CX3g027946 | LOC_Os03g50280 | Os03g0710700 | - | Detail |
| C1H3g30860 | 3:26,837,279-26,841,045 | + | C2H3g13816 | CX3g029821 | LOC_Os03g50290 | Os03g0710800 | GF14f, SR14-3-3 | Detail |
| C1H3g01378 | 3:26,844,719-26,852,846 | + | C2H3g13830 | CX3g029660 | LOC_Os03g50300 | Os03g0710900 | - | Detail |
| C1H3g31233 | 3:26,858,798-26,861,216 | + | C2H3g07676 | CX3g028553 | LOC_Os03g50310 | Os03g0711100 | OsCOL10, OsBBX10, OsJ, OsCCT14 | Detail |
| C1H3g26509 | 3:26,861,572-26,876,891 | - | C2H3g02097 | CX3g031158 | LOC_Os03g50320 | Os03g0711200 | - | Detail |
| C1H3g08523 | 3:26,878,922-26,886,708 | - | C2H3g27257 | CX3g026863 | LOC_Os03g50330 | Os03g0711300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001532 | 1:12,987,440-12,988,285 | + | C1H1g11009 | C2H1g01586 | LOC_Os01g25270 | Os01g0355100 | - | Detail |
| CX1g003683 | 1:12,998,358-12,998,750 | - | - | - | LOC_Os01g28882 | - | - | Detail |
| CX1g000994 | 1:13,022,266-13,024,231 | - | C1H1g00208 | C2H1g30396 | LOC_Os01g24710 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| CX1g000979 | 1:13,029,789-13,032,848 | + | C1H1g03032 | C2H1g02009 | LOC_Os01g27590 | Os01g0873000 | - | Detail |
| CX1g000600 | 1:13,033,394-13,034,423 | + | C1H1g30039 | C2H1g17996 | LOC_Os01g27580 | Os01g0872900 | - | Detail |
| CX1g005486 | 1:13,040,097-13,040,294 | + | - | - | LOC_Os01g25300 | Os01g0355400 | - | Detail |
| CX1g005915 | 1:13,043,141-13,053,202 | - | C1H1g26223 | C2H1g16578 | LOC_Os01g25320 | Os01g0355500 | - | Detail |
| CX1g003598 | 1:13,054,239-13,055,102 | + | C1H1g04484 | C2H1g00764 | - | - | - | Detail |
| CX1g006277 | 1:13,062,655-13,072,089 | + | C1H1g04297 | C2H1g03083 | LOC_Os01g25330 | Os01g0355600 | - | Detail |
| CX1g005783 | 1:13,074,892-13,076,427 | - | C1H1g19609 | C2H1g14542 | LOC_Os01g25340 | Os01g0355700 | - | Detail |
| CX1g000040 | 1:13,088,634-13,089,393 | + | C1H1g06316 | C2H1g21486 | LOC_Os01g25360 | Os01g0557100 | - | Detail |
| CX1g006683 | 1:13,091,643-13,095,571 | - | C1H1g19528 | C2H1g27635 | LOC_Os01g25370 | Os01g0355900 | OsELS1, OsELS1.3 | Detail |
| CX1g006558 | 1:13,118,064-13,134,417 | - | C1H1g25404 | C2H1g11601 | LOC_Os01g25386 | Os01g0356400 | - | Detail |
| CX1g006202 | 1:13,153,513-13,153,665 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g001500 | 1:13,162,740-13,167,564 | - | C1H1g30996 | C2H1g19253 | LOC_Os01g25440 | Os01g0356500 | - | Detail |
| CX1g005423 | 1:13,213,587-13,214,566 | + | - | - | - | - | - | Detail |
| CX1g001188 | 1:13,216,934-13,218,467 | - | C1H1g21011 | C2H1g27683 | LOC_Os01g25460 | Os01g0356900 | - | Detail |
| CX1g003071 | 1:13,226,772-13,230,284 | + | C1H1g05215 | C2H1g13428 | - | Os01g0807000 | - | Detail |
| CX1g006890 | 1:13,239,368-13,239,943 | - | C1H1g05215 | C2H1g13428 | - | - | - | Detail |
| CX1g003561 | 1:13,260,872-13,263,697 | + | C1H1g06998 | C2H1g19322 | LOC_Os04g47430 | Os01g0894100 | - | Detail |