| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g09802 | 1:27,367,711-27,375,588 | + | C2H1g19534 | CX1g004251 | LOC_Os01g53294 | Os01g0734200 | OsRbohA, OsNOX2 | Detail |
| C1H1g03864 | 1:27,377,917-27,378,810 | - | - | CX1g001402 | - | - | - | Detail |
| C1H1g16727 | 1:27,390,048-27,391,484 | + | C2H1g09241 | CX1g003337 | LOC_Os01g53350 | Os01g0734800 | - | Detail |
| C1H1g17596 | 1:27,402,036-27,403,511 | + | C2H1g27577 | CX1g000021 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| C1H1g12410 | 1:27,423,630-27,425,060 | - | C2H1g28000 | CX1g004334 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| C1H1g11199 | 1:27,430,155-27,431,579 | - | C2H1g03039 | CX1g005230 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| C1H1g10989 | 1:27,439,124-27,440,539 | - | C2H1g19693 | CX1g005230 | LOC_Os01g53460 | Os01g0736300 | OsUGT706D1 | Detail |
| C1H1g04228 | 1:27,440,820-27,444,367 | + | C2H1g23129 | CX1g005942 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| C1H1g11257 | 1:27,445,725-27,446,477 | + | C2H1g09664 | CX1g003434 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| C1H1g18188 | 1:27,461,175-27,463,166 | + | C2H1g22559 | CX1g003962 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| C1H1g17501 | 1:27,473,848-27,479,224 | + | C2H1g29848 | CX1g006682 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| C1H1g26053 | 1:27,485,298-27,487,538 | + | C2H1g23141 | CX1g007234 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| C1H1g28789 | 1:27,493,976-27,494,602 | + | C2H1g28481 | CX1g001301 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| C1H1g20246 | 1:27,496,365-27,500,643 | - | C2H1g06822 | CX1g004371 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| C1H1g10368 | 1:27,500,714-27,504,048 | + | C2H1g22933 | CX1g003960 | LOC_Os01g53610 | Os01g0737900 | DYW3 | Detail |
| C1H1g29380 | 1:27,505,981-27,507,556 | + | C2H1g30197 | CX1g007226 | LOC_Os01g53620 | Os01g0738000 | - | Detail |
| C1H1g12561 | 1:27,508,849-27,516,184 | - | C2H1g26273 | CX1g002866 | LOC_Os01g53630 | Os01g0738100 | - | Detail |
| C1H1g20235 | 1:27,533,651-27,540,451 | + | C2H1g06044 | CX1g000101 | LOC_Os01g53640 | Os01g0738300 | - | Detail |
| C1H1g20301 | 1:27,548,869-27,552,506 | + | C2H1g19036 | CX1g001943 | LOC_Os01g53660 | Os01g0738500 | - | Detail |
| C1H1g10504 | 1:27,553,198-27,556,755 | + | C2H1g22385 | CX1g000533 | LOC_Os01g53670 | Os01g0738600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001532 | 1:12,987,440-12,988,285 | + | C1H1g11009 | C2H1g01586 | LOC_Os01g25270 | Os01g0355100 | - | Detail |
| CX1g003683 | 1:12,998,358-12,998,750 | - | - | - | LOC_Os01g28882 | - | - | Detail |
| CX1g000994 | 1:13,022,266-13,024,231 | - | C1H1g00208 | C2H1g30396 | LOC_Os01g24710 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| CX1g000979 | 1:13,029,789-13,032,848 | + | C1H1g03032 | C2H1g02009 | LOC_Os01g27590 | Os01g0873000 | - | Detail |
| CX1g000600 | 1:13,033,394-13,034,423 | + | C1H1g30039 | C2H1g17996 | LOC_Os01g27580 | Os01g0872900 | - | Detail |
| CX1g005486 | 1:13,040,097-13,040,294 | + | - | - | LOC_Os01g25300 | Os01g0355400 | - | Detail |
| CX1g005915 | 1:13,043,141-13,053,202 | - | C1H1g26223 | C2H1g16578 | LOC_Os01g25320 | Os01g0355500 | - | Detail |
| CX1g003598 | 1:13,054,239-13,055,102 | + | C1H1g04484 | C2H1g00764 | - | - | - | Detail |
| CX1g006277 | 1:13,062,655-13,072,089 | + | C1H1g04297 | C2H1g03083 | LOC_Os01g25330 | Os01g0355600 | - | Detail |
| CX1g005783 | 1:13,074,892-13,076,427 | - | C1H1g19609 | C2H1g14542 | LOC_Os01g25340 | Os01g0355700 | - | Detail |
| CX1g000040 | 1:13,088,634-13,089,393 | + | C1H1g06316 | C2H1g21486 | LOC_Os01g25360 | Os01g0557100 | - | Detail |
| CX1g006683 | 1:13,091,643-13,095,571 | - | C1H1g19528 | C2H1g27635 | LOC_Os01g25370 | Os01g0355900 | OsELS1, OsELS1.3 | Detail |
| CX1g006558 | 1:13,118,064-13,134,417 | - | C1H1g25404 | C2H1g11601 | LOC_Os01g25386 | Os01g0356400 | - | Detail |
| CX1g006202 | 1:13,153,513-13,153,665 | + | - | - | - | Os01g0728000 | - | Detail |
| CX1g001500 | 1:13,162,740-13,167,564 | - | C1H1g30996 | C2H1g19253 | LOC_Os01g25440 | Os01g0356500 | - | Detail |
| CX1g005423 | 1:13,213,587-13,214,566 | + | - | - | - | - | - | Detail |
| CX1g001188 | 1:13,216,934-13,218,467 | - | C1H1g21011 | C2H1g27683 | LOC_Os01g25460 | Os01g0356900 | - | Detail |
| CX1g003071 | 1:13,226,772-13,230,284 | + | C1H1g05215 | C2H1g13428 | - | Os01g0807000 | - | Detail |
| CX1g006890 | 1:13,239,368-13,239,943 | - | C1H1g05215 | C2H1g13428 | - | - | - | Detail |
| CX1g003561 | 1:13,260,872-13,263,697 | + | C1H1g06998 | C2H1g19322 | LOC_Os04g47430 | Os01g0894100 | - | Detail |