| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19964 | 4:16,380,636-16,382,143 | + | C1H4g06922 | CX4g033567 | LOC_Os04g32320 | - | - | Detail |
| C2H4g18193 | 4:16,382,283-16,383,247 | + | C1H4g06922 | CX4g034392 | LOC_Os04g32320 | Os04g0394100 | - | Detail |
| C2H4g16524 | 4:16,384,767-16,389,103 | + | C1H4g17845 | CX4g035538 | LOC_Os04g32330 | Os04g0394200 | - | Detail |
| C2H4g25961 | 4:16,389,633-16,397,330 | - | C1H4g05869 | CX4g034536 | LOC_Os04g32340 | Os04g0394300 | - | Detail |
| C2H4g27874 | 4:16,401,522-16,407,381 | - | C1H4g02701 | CX4g036042 | LOC_Os04g32350 | Os04g0394500 | DGS1, RPC4 | Detail |
| C2H4g13468 | 4:16,417,595-16,424,549 | + | C1H4g04290 | CX4g032930 | LOC_Os04g32370 | Os04g0394700 | - | Detail |
| C2H4g07831 | 4:16,440,382-16,444,853 | - | C1H4g22256 | CX4g033841 | LOC_Os04g32460 | Os04g0395600 | - | Detail |
| C2H4g01216 | 4:16,464,280-16,464,816 | - | C1H4g21629 | CX4g036177 | LOC_Os04g32470 | Os04g0395700 | - | Detail |
| C2H4g05465 | 4:16,475,450-16,479,216 | + | C1H4g00131 | CX4g033931 | LOC_Os04g32480 | Os04g0395800 | - | Detail |
| C2H4g15362 | 4:16,481,596-16,487,126 | - | C1H4g20584 | CX4g035337 | LOC_Os04g32490 | Os04g0395900 | - | Detail |
| C2H4g27206 | 4:16,549,896-16,561,697 | + | C1H4g10776 | CX4g031625 | LOC_Os04g32510 | Os04g0396500 | LAX2 | Detail |
| C2H4g12362 | 4:16,598,626-16,602,409 | + | C1H4g30291 | CX4g032605 | LOC_Os04g32540 | Os04g0396800 | - | Detail |
| C2H4g11756 | 4:16,608,414-16,609,643 | + | C1H4g11763 | CX4g036117 | LOC_Os04g32550 | Os04g0397000 | - | Detail |
| C2H4g07574 | 4:16,610,422-16,616,979 | - | C1H4g04793 | CX4g034837 | LOC_Os04g32560 | Os04g0397100 | - | Detail |
| C2H4g00787 | 4:16,620,097-16,622,038 | + | C1H4g23944 | CX4g031977 | LOC_Os04g32580 | Os04g0397400 | - | Detail |
| C2H4g00959 | 4:16,622,697-16,625,333 | - | C1H4g13851 | CX4g033053 | LOC_Os04g32590 | Os04g0397500 | - | Detail |
| C2H4g13266 | 4:16,634,069-16,634,282 | + | C1H4g24982 | - | LOC_Os04g32600 | Os04g0397700 | - | Detail |
| C2H4g24848 | 4:16,634,291-16,636,040 | + | C1H4g24982 | - | LOC_Os04g32600 | Os04g0397700 | - | Detail |
| C2H4g18306 | 4:16,650,397-16,653,619 | + | C1H4g01528 | CX4g032640 | LOC_Os04g32620 | Os04g0398000 | - | Detail |
| C2H4g26614 | 4:16,672,397-16,677,612 | + | C1H4g13821 | CX4g036075 | LOC_Os04g32650 | Os04g0398300 | OsGlyRS1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026290 | 3:987,680-991,043 | - | C1H3g03441 | C2H3g02407 | LOC_Os03g02850 | Os03g0120300 | - | Detail |
| CX3g025360 | 3:992,564-994,067 | - | C1H3g10934 | C2H3g11600 | LOC_Os03g02860 | Os03g0120400 | - | Detail |
| CX3g028149 | 3:1,002,459-1,004,390 | + | C1H3g08539 | C2H3g16408 | LOC_Os03g02890 | - | - | Detail |
| CX3g029289 | 3:1,020,505-1,021,431 | + | C1H3g19352 | C2H3g18948 | LOC_Os03g02900 | Os03g0120900 | - | Detail |
| CX3g025034 | 3:1,039,018-1,042,674 | - | C1H3g28264 | C2H3g18738 | LOC_Os03g02920 | Os03g0121200 | - | Detail |
| CX3g026688 | 3:1,045,259-1,046,803 | - | C1H3g20047 | C2H3g23557 | LOC_Os03g02939 | Os03g0121300 | - | Detail |
| CX3g025202 | 3:1,053,536-1,054,655 | + | C1H3g01141 | C2H3g04065 | LOC_Os03g02960 | Os03g0121700 | - | Detail |
| CX3g027774 | 3:1,055,254-1,064,117 | - | C1H3g02111 | C2H3g16968 | LOC_Os03g02970 | Os03g0121800 | DCL1, Dcl1, OsDCL1, osDCL1, Os-DCL1 | Detail |
| CX3g028931 | 3:1,075,583-1,081,155 | + | C1H3g23785 | C2H3g23905 | LOC_Os03g02980 | Os03g0122000 | - | Detail |
| CX3g026004 | 3:1,089,772-1,092,681 | + | C1H3g07706 | C2H3g24994 | LOC_Os03g03000 | Os03g0122100 | - | Detail |
| CX3g025069 | 3:1,095,502-1,097,395 | - | C1H3g24387 | C2H3g11967 | LOC_Os03g03020 | Os03g0122200 | - | Detail |
| CX3g031243 | 3:1,098,639-1,104,085 | - | C1H3g05611 | C2H3g05774 | LOC_Os03g03034 | Os03g0122300 | - | Detail |
| CX3g030620 | 3:1,104,561-1,105,127 | + | - | - | LOC_Os03g13430 | - | - | Detail |
| CX3g028116 | 3:1,110,582-1,110,773 | - | - | - | - | - | - | Detail |
| CX3g030143 | 3:1,117,115-1,118,185 | - | C1H2g14717 | - | - | - | - | Detail |
| CX3g027036 | 3:1,119,858-1,124,439 | - | C1H3g26838 | C2H3g15040 | LOC_Os03g03070 | Os03g0122600 | - | Detail |
| CX3g025481 | 3:1,145,174-1,145,446 | - | C1H3g04456 | C2H3g18287 | LOC_Os03g03100 | Os03g0122600 | - | Detail |
| CX3g029387 | 3:1,146,298-1,146,456 | - | - | - | - | - | - | Detail |
| CX3g030323 | 3:1,150,972-1,151,226 | - | - | - | - | - | - | Detail |
| CX3g025474 | 3:1,157,411-1,159,598 | - | C1H3g05064 | C2H9g16327 | LOC_Os04g22720 | Os08g0392500 | - | Detail |