| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g02080 | 2:26,686,966-26,690,409 | + | C1H2g09622 | CX2g022772 | LOC_Os02g47360 | Os02g0702000 | OSOTP51, SSA1 | Detail |
| C2H2g03187 | 2:26,690,587-26,690,919 | - | C1H4g19881 | CX2g022159 | LOC_Os02g47370 | Os02g0702100 | - | Detail |
| C2H2g00977 | 2:26,696,996-26,699,871 | + | C1H2g18788 | CX2g019179 | LOC_Os02g47400 | Os02g0702400 | - | Detail |
| C2H2g26384 | 2:26,701,060-26,709,768 | - | C1H2g17296 | CX2g023268 | LOC_Os02g47410 | Os02g0702500 | - | Detail |
| C2H2g00034 | 2:26,714,460-26,720,775 | - | C1H2g14738 | CX2g020864 | LOC_Os02g47420 | Os02g0702600 | - | Detail |
| C2H2g04827 | 2:26,729,670-26,736,145 | - | C1H2g23661 | CX2g020499 | LOC_Os02g47440 | Os02g0702800 | OsSYP21 | Detail |
| C2H2g13380 | 2:26,739,849-26,740,673 | + | C1H2g10840 | CX2g023044 | LOC_Os02g47450 | Os02g0703300 | - | Detail |
| C2H2g24088 | 2:26,753,630-26,755,553 | + | C1H2g06866 | CX2g021944 | LOC_Os02g45280 | Os02g0703600 | OsABA8ox1, CYP707A5 | Detail |
| C2H2g17501 | 2:26,765,805-26,766,329 | - | C1H2g25877 | CX2g023081 | LOC_Os02g47490 | Os02g0703800 | - | Detail |
| C2H2g26119 | 2:26,767,282-26,770,440 | + | C1H2g27896 | CX2g022994 | LOC_Os02g47500 | Os02g0703900 | - | Detail |
| C2H2g15070 | 2:26,770,724-26,772,592 | - | - | - | LOC_Os02g47510 | Os02g0704000 | OsCCD4a, OsNCED1 | Detail |
| C2H2g28790 | 2:26,783,252-26,787,937 | - | C1H2g28522 | CX2g020240 | LOC_Os02g47560 | Os02g0704300 | OsDNA2_6 | Detail |
| C2H2g08817 | 2:26,791,354-26,794,394 | + | C1H2g16636 | CX2g021465 | LOC_Os02g47570 | Os02g0704500 | - | Detail |
| C2H2g10092 | 2:26,794,932-26,798,822 | - | - | CX2g023515 | LOC_Os02g47580 | Os02g0704600 | - | Detail |
| C2H2g14274 | 2:26,800,069-26,804,443 | + | C1H2g06692 | CX2g019220 | LOC_Os02g47590 | Os02g0704800 | - | Detail |
| C2H2g01483 | 2:26,805,227-26,810,278 | - | C1H2g18129 | CX2g024385 | LOC_Os02g47600 | Os02g0704900 | - | Detail |
| C2H2g24836 | 2:26,811,987-26,816,190 | - | C1H2g09314 | CX2g023079 | LOC_Os02g47605 | Os02g0704966 | - | Detail |
| C2H2g07681 | 2:26,816,280-26,820,804 | - | C1H2g07748 | CX2g020107 | LOC_Os02g47610 | Os02g0705000 | - | Detail |
| C2H2g27957 | 2:26,822,687-26,824,919 | - | C1H2g06203 | CX2g024556 | LOC_Os02g47620 | Os02g0705100 | - | Detail |
| C2H2g29851 | 2:26,832,630-26,836,180 | + | C1H2g14377 | CX2g023714 | LOC_Os02g47640 | Os02g0705300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026290 | 3:987,680-991,043 | - | C1H3g03441 | C2H3g02407 | LOC_Os03g02850 | Os03g0120300 | - | Detail |
| CX3g025360 | 3:992,564-994,067 | - | C1H3g10934 | C2H3g11600 | LOC_Os03g02860 | Os03g0120400 | - | Detail |
| CX3g028149 | 3:1,002,459-1,004,390 | + | C1H3g08539 | C2H3g16408 | LOC_Os03g02890 | - | - | Detail |
| CX3g029289 | 3:1,020,505-1,021,431 | + | C1H3g19352 | C2H3g18948 | LOC_Os03g02900 | Os03g0120900 | - | Detail |
| CX3g025034 | 3:1,039,018-1,042,674 | - | C1H3g28264 | C2H3g18738 | LOC_Os03g02920 | Os03g0121200 | - | Detail |
| CX3g026688 | 3:1,045,259-1,046,803 | - | C1H3g20047 | C2H3g23557 | LOC_Os03g02939 | Os03g0121300 | - | Detail |
| CX3g025202 | 3:1,053,536-1,054,655 | + | C1H3g01141 | C2H3g04065 | LOC_Os03g02960 | Os03g0121700 | - | Detail |
| CX3g027774 | 3:1,055,254-1,064,117 | - | C1H3g02111 | C2H3g16968 | LOC_Os03g02970 | Os03g0121800 | DCL1, Dcl1, OsDCL1, osDCL1, Os-DCL1 | Detail |
| CX3g028931 | 3:1,075,583-1,081,155 | + | C1H3g23785 | C2H3g23905 | LOC_Os03g02980 | Os03g0122000 | - | Detail |
| CX3g026004 | 3:1,089,772-1,092,681 | + | C1H3g07706 | C2H3g24994 | LOC_Os03g03000 | Os03g0122100 | - | Detail |
| CX3g025069 | 3:1,095,502-1,097,395 | - | C1H3g24387 | C2H3g11967 | LOC_Os03g03020 | Os03g0122200 | - | Detail |
| CX3g031243 | 3:1,098,639-1,104,085 | - | C1H3g05611 | C2H3g05774 | LOC_Os03g03034 | Os03g0122300 | - | Detail |
| CX3g030620 | 3:1,104,561-1,105,127 | + | - | - | LOC_Os03g13430 | - | - | Detail |
| CX3g028116 | 3:1,110,582-1,110,773 | - | - | - | - | - | - | Detail |
| CX3g030143 | 3:1,117,115-1,118,185 | - | C1H2g14717 | - | - | - | - | Detail |
| CX3g027036 | 3:1,119,858-1,124,439 | - | C1H3g26838 | C2H3g15040 | LOC_Os03g03070 | Os03g0122600 | - | Detail |
| CX3g025481 | 3:1,145,174-1,145,446 | - | C1H3g04456 | C2H3g18287 | LOC_Os03g03100 | Os03g0122600 | - | Detail |
| CX3g029387 | 3:1,146,298-1,146,456 | - | - | - | - | - | - | Detail |
| CX3g030323 | 3:1,150,972-1,151,226 | - | - | - | - | - | - | Detail |
| CX3g025474 | 3:1,157,411-1,159,598 | - | C1H3g05064 | C2H9g16327 | LOC_Os04g22720 | Os08g0392500 | - | Detail |