| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g17646 | 1:38,129,980-38,130,688 | + | C1H1g07020 | CX1g006503 | LOC_Os01g74340 | Os01g0974701 | - | Detail |
| C2H1g29036 | 1:38,131,908-38,133,210 | - | C1H1g24870 | CX1g003882 | LOC_Os01g74350 | Os01g0974800 | - | Detail |
| C2H1g11687 | 1:38,134,806-38,135,098 | - | C1H1g25105 | CX1g003190 | - | - | - | Detail |
| C2H1g23261 | 1:38,136,384-38,137,536 | - | C1H1g11140 | CX1g005588 | LOC_Os01g74370 | Os01g0975000 | - | Detail |
| C2H1g00046 | 1:38,141,734-38,142,757 | + | C1H1g20453 | CX1g004945 | LOC_Os01g74410 | Os01g0975300 | - | Detail |
| C2H1g28574 | 1:38,146,473-38,147,620 | + | C1H1g23264 | - | - | - | - | Detail |
| C2H1g00932 | 1:38,147,827-38,148,462 | + | C1H1g23264 | CX1g004255 | LOC_Os01g58160 | - | - | Detail |
| C2H1g01068 | 1:38,154,973-38,155,602 | + | C1H1g08219 | CX1g003699 | LOC_Os01g74440 | Os01g0975800 | MADS79 | Detail |
| C2H1g19458 | 1:38,158,726-38,159,560 | - | C1H1g02174 | CX1g006077 | LOC_Os01g74450 | Os01g0975900 | - | Detail |
| C2H1g03008 | 1:38,162,678-38,168,169 | - | C1H1g10248 | CX1g006488 | LOC_Os01g74460 | Os01g0976000 | MON1 | Detail |
| C2H1g29806 | 1:38,171,025-38,179,061 | - | C1H1g23123 | CX1g006587 | LOC_Os01g74470 | Os01g0976100 | - | Detail |
| C2H1g05558 | 1:38,185,766-38,186,392 | + | C1H1g04013 | CX1g003039 | LOC_Os01g74490 | Os01g0976300 | - | Detail |
| C2H1g15344 | 1:38,187,566-38,192,165 | + | C1H1g31465 | CX1g004080 | LOC_Os01g74500 | Os01g0976450 | - | Detail |
| C2H1g17772 | 1:38,192,817-38,196,408 | + | C1H1g00111 | CX1g003446 | LOC_Os01g74510 | Os01g0976500 | - | Detail |
| C2H1g05896 | 1:38,198,338-38,201,659 | - | C1H1g31006 | CX1g003902 | LOC_Os01g74520 | Os01g0976600 | - | Detail |
| C2H1g11672 | 1:38,203,586-38,206,890 | - | C1H1g13528 | CX1g001345 | LOC_Os01g74530 | Os01g0976700 | - | Detail |
| C2H1g08596 | 1:38,208,998-38,209,508 | - | C1H1g28719 | CX1g005337 | LOC_Os01g74540 | Os01g0976800 | GATA10 | Detail |
| C2H1g27561 | 1:38,211,836-38,215,585 | - | C1H1g02636 | CX1g006826 | LOC_Os01g74550 | Os01g0976900 | - | Detail |
| C2H1g13292 | 1:38,217,756-38,225,374 | + | C1H1g05726 | CX1g000198 | LOC_Os01g74570 | Os01g0977200 | - | Detail |
| C2H1g30278 | 1:38,234,078-38,246,849 | - | C1H1g07474 | CX1g002702 | LOC_Os01g74610 | Os01g0977600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026290 | 3:987,680-991,043 | - | C1H3g03441 | C2H3g02407 | LOC_Os03g02850 | Os03g0120300 | - | Detail |
| CX3g025360 | 3:992,564-994,067 | - | C1H3g10934 | C2H3g11600 | LOC_Os03g02860 | Os03g0120400 | - | Detail |
| CX3g028149 | 3:1,002,459-1,004,390 | + | C1H3g08539 | C2H3g16408 | LOC_Os03g02890 | - | - | Detail |
| CX3g029289 | 3:1,020,505-1,021,431 | + | C1H3g19352 | C2H3g18948 | LOC_Os03g02900 | Os03g0120900 | - | Detail |
| CX3g025034 | 3:1,039,018-1,042,674 | - | C1H3g28264 | C2H3g18738 | LOC_Os03g02920 | Os03g0121200 | - | Detail |
| CX3g026688 | 3:1,045,259-1,046,803 | - | C1H3g20047 | C2H3g23557 | LOC_Os03g02939 | Os03g0121300 | - | Detail |
| CX3g025202 | 3:1,053,536-1,054,655 | + | C1H3g01141 | C2H3g04065 | LOC_Os03g02960 | Os03g0121700 | - | Detail |
| CX3g027774 | 3:1,055,254-1,064,117 | - | C1H3g02111 | C2H3g16968 | LOC_Os03g02970 | Os03g0121800 | DCL1, Dcl1, OsDCL1, osDCL1, Os-DCL1 | Detail |
| CX3g028931 | 3:1,075,583-1,081,155 | + | C1H3g23785 | C2H3g23905 | LOC_Os03g02980 | Os03g0122000 | - | Detail |
| CX3g026004 | 3:1,089,772-1,092,681 | + | C1H3g07706 | C2H3g24994 | LOC_Os03g03000 | Os03g0122100 | - | Detail |
| CX3g025069 | 3:1,095,502-1,097,395 | - | C1H3g24387 | C2H3g11967 | LOC_Os03g03020 | Os03g0122200 | - | Detail |
| CX3g031243 | 3:1,098,639-1,104,085 | - | C1H3g05611 | C2H3g05774 | LOC_Os03g03034 | Os03g0122300 | - | Detail |
| CX3g030620 | 3:1,104,561-1,105,127 | + | - | - | LOC_Os03g13430 | - | - | Detail |
| CX3g028116 | 3:1,110,582-1,110,773 | - | - | - | - | - | - | Detail |
| CX3g030143 | 3:1,117,115-1,118,185 | - | C1H2g14717 | - | - | - | - | Detail |
| CX3g027036 | 3:1,119,858-1,124,439 | - | C1H3g26838 | C2H3g15040 | LOC_Os03g03070 | Os03g0122600 | - | Detail |
| CX3g025481 | 3:1,145,174-1,145,446 | - | C1H3g04456 | C2H3g18287 | LOC_Os03g03100 | Os03g0122600 | - | Detail |
| CX3g029387 | 3:1,146,298-1,146,456 | - | - | - | - | - | - | Detail |
| CX3g030323 | 3:1,150,972-1,151,226 | - | - | - | - | - | - | Detail |
| CX3g025474 | 3:1,157,411-1,159,598 | - | C1H3g05064 | C2H9g16327 | LOC_Os04g22720 | Os08g0392500 | - | Detail |