| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g24254 | 5:22,675,993-22,680,453 | - | C2H5g10055 | CX5g039930 | LOC_Os05g48380 | Os05g0557600 | - | Detail |
| C1H5g01069 | 5:22,682,192-22,689,945 | - | C2H5g25746 | CX5g041031 | LOC_Os05g48390 | Os05g0557700 | LTN1, PHO2.2 | Detail |
| C1H5g26384 | 5:22,698,388-22,700,879 | - | C2H5g26773 | CX5g036872 | LOC_Os05g48410 | Os05g0557800 | - | Detail |
| C1H5g08534 | 5:22,701,479-22,703,815 | - | C2H5g03768 | CX5g040711 | LOC_Os05g48416 | Os05g0557900 | - | Detail |
| C1H5g13071 | 5:22,706,651-22,707,901 | - | C2H5g19124 | CX5g037638 | LOC_Os05g48422 | Os05g0558000 | - | Detail |
| C1H5g24420 | 5:22,715,007-22,715,792 | - | C2H5g11101 | CX5g040952 | LOC_Os05g48489 | Os05g0457800 | - | Detail |
| C1H5g06098 | 5:22,716,108-22,722,114 | + | C2H5g00508 | CX5g037184 | LOC_Os05g48450 | Os05g0558400 | OsBCAT4 | Detail |
| C1H5g05403 | 5:22,727,494-22,727,883 | - | C2H5g28108 | CX9g057071 | LOC_Os05g48440 | Os05g0353100 | - | Detail |
| C1H5g08257 | 5:22,730,768-22,735,639 | + | C2H5g13714 | CX5g039815 | LOC_Os05g48500 | Os05g0558800 | - | Detail |
| C1H5g19475 | 5:22,738,181-22,744,678 | + | C2H5g18563 | CX5g038975 | LOC_Os05g48510 | Os05g0558900 | - | Detail |
| C1H5g12218 | 5:22,744,883-22,746,751 | - | C2H5g19891 | CX5g038139 | LOC_Os05g48520 | Os05g0559000 | - | Detail |
| C1H5g10473 | 5:22,762,294-22,762,780 | - | C2H5g17680 | CX5g039256 | LOC_Os05g48570 | Os05g0559316 | - | Detail |
| C1H5g08715 | 5:22,767,864-22,768,946 | - | C2H5g06270 | CX5g038826 | LOC_Os05g48580 | Os05g0559350 | - | Detail |
| C1H5g27784 | 5:22,774,315-22,778,400 | - | C2H5g14650 | CX5g039828 | LOC_Os05g48590 | Os05g0559400 | - | Detail |
| C1H5g20148 | 5:22,786,211-22,790,791 | + | C2H5g25174 | CX5g037678 | LOC_Os05g48600 | Os05g0559600 | OsGT43E | Detail |
| C1H5g04745 | 5:22,793,425-22,793,937 | + | C2H5g23630 | CX5g037832 | LOC_Os05g48610 | Os05g0559800 | - | Detail |
| C1H5g10502 | 5:22,794,138-22,804,017 | - | C2H5g12589 | CX5g040407 | LOC_Os05g48620 | Os05g0559900 | - | Detail |
| C1H5g25744 | 5:22,805,278-22,806,344 | + | C2H5g00100 | CX5g038817 | LOC_Os05g48630 | Os05g0560000 | - | Detail |
| C1H5g19833 | 5:22,806,817-22,809,708 | - | C2H5g06003 | CX5g038416 | LOC_Os05g48640 | Os05g0560100 | OsRopGEF2 | Detail |
| C1H5g26191 | 5:22,810,653-22,811,324 | - | C2H5g16951 | CX5g036968 | LOC_Os05g48650 | Os05g0560200 | OsDOG1L-2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026290 | 3:987,680-991,043 | - | C1H3g03441 | C2H3g02407 | LOC_Os03g02850 | Os03g0120300 | - | Detail |
| CX3g025360 | 3:992,564-994,067 | - | C1H3g10934 | C2H3g11600 | LOC_Os03g02860 | Os03g0120400 | - | Detail |
| CX3g028149 | 3:1,002,459-1,004,390 | + | C1H3g08539 | C2H3g16408 | LOC_Os03g02890 | - | - | Detail |
| CX3g029289 | 3:1,020,505-1,021,431 | + | C1H3g19352 | C2H3g18948 | LOC_Os03g02900 | Os03g0120900 | - | Detail |
| CX3g025034 | 3:1,039,018-1,042,674 | - | C1H3g28264 | C2H3g18738 | LOC_Os03g02920 | Os03g0121200 | - | Detail |
| CX3g026688 | 3:1,045,259-1,046,803 | - | C1H3g20047 | C2H3g23557 | LOC_Os03g02939 | Os03g0121300 | - | Detail |
| CX3g025202 | 3:1,053,536-1,054,655 | + | C1H3g01141 | C2H3g04065 | LOC_Os03g02960 | Os03g0121700 | - | Detail |
| CX3g027774 | 3:1,055,254-1,064,117 | - | C1H3g02111 | C2H3g16968 | LOC_Os03g02970 | Os03g0121800 | DCL1, Dcl1, OsDCL1, osDCL1, Os-DCL1 | Detail |
| CX3g028931 | 3:1,075,583-1,081,155 | + | C1H3g23785 | C2H3g23905 | LOC_Os03g02980 | Os03g0122000 | - | Detail |
| CX3g026004 | 3:1,089,772-1,092,681 | + | C1H3g07706 | C2H3g24994 | LOC_Os03g03000 | Os03g0122100 | - | Detail |
| CX3g025069 | 3:1,095,502-1,097,395 | - | C1H3g24387 | C2H3g11967 | LOC_Os03g03020 | Os03g0122200 | - | Detail |
| CX3g031243 | 3:1,098,639-1,104,085 | - | C1H3g05611 | C2H3g05774 | LOC_Os03g03034 | Os03g0122300 | - | Detail |
| CX3g030620 | 3:1,104,561-1,105,127 | + | - | - | LOC_Os03g13430 | - | - | Detail |
| CX3g028116 | 3:1,110,582-1,110,773 | - | - | - | - | - | - | Detail |
| CX3g030143 | 3:1,117,115-1,118,185 | - | C1H2g14717 | - | - | - | - | Detail |
| CX3g027036 | 3:1,119,858-1,124,439 | - | C1H3g26838 | C2H3g15040 | LOC_Os03g03070 | Os03g0122600 | - | Detail |
| CX3g025481 | 3:1,145,174-1,145,446 | - | C1H3g04456 | C2H3g18287 | LOC_Os03g03100 | Os03g0122600 | - | Detail |
| CX3g029387 | 3:1,146,298-1,146,456 | - | - | - | - | - | - | Detail |
| CX3g030323 | 3:1,150,972-1,151,226 | - | - | - | - | - | - | Detail |
| CX3g025474 | 3:1,157,411-1,159,598 | - | C1H3g05064 | C2H9g16327 | LOC_Os04g22720 | Os08g0392500 | - | Detail |