| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g00173 | 2:32,404,488-32,405,567 | + | C2H2g06569 | CX2g019084 | LOC_Os02g57840 | Os02g0824500 | - | Detail |
| C1H2g03458 | 2:32,406,612-32,407,629 | - | C2H2g20433 | CX2g020693 | LOC_Os02g57850 | Os02g0824600 | - | Detail |
| C1H2g01066 | 2:32,411,428-32,415,636 | - | C2H2g07944 | CX2g022145 | LOC_Os02g57870 | Os02g0826000 | - | Detail |
| C1H2g15349 | 2:32,418,106-32,420,060 | - | C2H2g21189 | CX2g022145 | LOC_Os02g57880 | Os02g0825500 | - | Detail |
| C1H2g28472 | 2:32,435,585-32,437,979 | - | C2H2g27349 | CX2g022145 | LOC_Os02g57960 | Os02g0826000 | - | Detail |
| C1H2g08212 | 2:32,447,176-32,452,676 | - | C2H2g23834 | CX2g020968 | LOC_Os02g57980 | Os02g0826100 | - | Detail |
| C1H2g11587 | 2:32,452,837-32,455,093 | + | C2H2g05583 | CX2g021161 | LOC_Os02g57990 | Os02g0826200 | - | Detail |
| C1H2g23760 | 2:32,460,754-32,460,993 | - | C2H2g04363 | - | LOC_Os02g58010 | - | - | Detail |
| C1H2g10732 | 2:32,461,512-32,467,319 | - | C2H2g20953 | CX2g021152 | LOC_Os02g58020 | Os02g0826500 | - | Detail |
| C1H2g05947 | 2:32,467,355-32,469,440 | - | C2H2g01162 | CX2g022145 | LOC_Os02g57910 | Os02g0826566 | - | Detail |
| C1H2g23547 | 2:32,471,780-32,474,609 | + | C2H2g20068 | CX2g022373 | - | - | - | Detail |
| C1H2g06856 | 2:32,476,180-32,477,735 | - | C2H2g14467 | CX2g022145 | LOC_Os02g57890 | Os02g0826675 | - | Detail |
| C1H2g00767 | 2:32,478,100-32,485,906 | - | C2H2g14467 | CX2g021686 | LOC_Os02g58030 | Os02g0826600 | OsIRL6 | Detail |
| C1H2g20704 | 2:32,505,242-32,508,816 | - | C2H2g24528 | - | - | - | - | Detail |
| C1H2g05731 | 2:32,538,010-32,539,713 | + | C2H2g16616 | - | - | - | - | Detail |
| C1H2g13111 | 2:32,548,987-32,551,608 | + | C2H2g18185 | CX2g019486 | LOC_Os02g58070 | Os02g0827100 | - | Detail |
| C1H2g01779 | 2:32,552,131-32,556,841 | + | C2H2g14679 | CX2g024299 | LOC_Os02g58080 | Os02g0827200 | - | Detail |
| C1H2g14203 | 2:32,557,264-32,562,222 | + | C2H2g12823 | CX2g021389 | LOC_Os02g58090 | Os02g0827300 | - | Detail |
| C1H2g17767 | 2:32,562,951-32,564,514 | + | C2H2g07859 | CX2g020312 | LOC_Os02g58100 | Os02g0827400 | - | Detail |
| C1H2g25555 | 2:32,565,987-32,571,035 | + | C2H2g08276 | CX2g020655 | LOC_Os02g58110 | Os02g0827500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026290 | 3:987,680-991,043 | - | C1H3g03441 | C2H3g02407 | LOC_Os03g02850 | Os03g0120300 | - | Detail |
| CX3g025360 | 3:992,564-994,067 | - | C1H3g10934 | C2H3g11600 | LOC_Os03g02860 | Os03g0120400 | - | Detail |
| CX3g028149 | 3:1,002,459-1,004,390 | + | C1H3g08539 | C2H3g16408 | LOC_Os03g02890 | - | - | Detail |
| CX3g029289 | 3:1,020,505-1,021,431 | + | C1H3g19352 | C2H3g18948 | LOC_Os03g02900 | Os03g0120900 | - | Detail |
| CX3g025034 | 3:1,039,018-1,042,674 | - | C1H3g28264 | C2H3g18738 | LOC_Os03g02920 | Os03g0121200 | - | Detail |
| CX3g026688 | 3:1,045,259-1,046,803 | - | C1H3g20047 | C2H3g23557 | LOC_Os03g02939 | Os03g0121300 | - | Detail |
| CX3g025202 | 3:1,053,536-1,054,655 | + | C1H3g01141 | C2H3g04065 | LOC_Os03g02960 | Os03g0121700 | - | Detail |
| CX3g027774 | 3:1,055,254-1,064,117 | - | C1H3g02111 | C2H3g16968 | LOC_Os03g02970 | Os03g0121800 | DCL1, Dcl1, OsDCL1, osDCL1, Os-DCL1 | Detail |
| CX3g028931 | 3:1,075,583-1,081,155 | + | C1H3g23785 | C2H3g23905 | LOC_Os03g02980 | Os03g0122000 | - | Detail |
| CX3g026004 | 3:1,089,772-1,092,681 | + | C1H3g07706 | C2H3g24994 | LOC_Os03g03000 | Os03g0122100 | - | Detail |
| CX3g025069 | 3:1,095,502-1,097,395 | - | C1H3g24387 | C2H3g11967 | LOC_Os03g03020 | Os03g0122200 | - | Detail |
| CX3g031243 | 3:1,098,639-1,104,085 | - | C1H3g05611 | C2H3g05774 | LOC_Os03g03034 | Os03g0122300 | - | Detail |
| CX3g030620 | 3:1,104,561-1,105,127 | + | - | - | LOC_Os03g13430 | - | - | Detail |
| CX3g028116 | 3:1,110,582-1,110,773 | - | - | - | - | - | - | Detail |
| CX3g030143 | 3:1,117,115-1,118,185 | - | C1H2g14717 | - | - | - | - | Detail |
| CX3g027036 | 3:1,119,858-1,124,439 | - | C1H3g26838 | C2H3g15040 | LOC_Os03g03070 | Os03g0122600 | - | Detail |
| CX3g025481 | 3:1,145,174-1,145,446 | - | C1H3g04456 | C2H3g18287 | LOC_Os03g03100 | Os03g0122600 | - | Detail |
| CX3g029387 | 3:1,146,298-1,146,456 | - | - | - | - | - | - | Detail |
| CX3g030323 | 3:1,150,972-1,151,226 | - | - | - | - | - | - | Detail |
| CX3g025474 | 3:1,157,411-1,159,598 | - | C1H3g05064 | C2H9g16327 | LOC_Os04g22720 | Os08g0392500 | - | Detail |