| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22655 | 4:18,351,919-18,352,857 | - | C1H4g14575 | CX4g034540 | LOC_Os04g35300 | Os04g0432600 | - | Detail |
| C2H4g20356 | 4:18,354,135-18,356,123 | - | C1H4g23042 | CX4g035650 | LOC_Os04g35305 | Os04g0432800 | - | Detail |
| C2H4g07440 | 4:18,363,696-18,364,862 | - | C1H4g18091 | CX4g036629 | LOC_Os04g35310 | Os04g0625600 | - | Detail |
| C2H4g18419 | 4:18,367,836-18,368,936 | - | C1H4g18091 | CX4g036629 | LOC_Os04g35370 | Os04g0625600 | - | Detail |
| C2H4g22168 | 4:18,393,411-18,398,613 | + | C1H4g18234 | CX4g032398 | LOC_Os04g35380 | Os04g0433200 | - | Detail |
| C2H4g19405 | 4:18,405,988-18,407,176 | + | C1H4g24371 | CX4g032298 | LOC_Os04g35390 | Os04g0433300 | - | Detail |
| C2H4g16542 | 4:18,415,440-18,416,284 | - | - | CX4g034124 | - | - | - | Detail |
| C2H4g19627 | 4:18,420,191-18,424,424 | - | C1H4g04051 | CX4g033528 | LOC_Os04g35410 | Os04g0433600 | - | Detail |
| C2H4g01376 | 4:18,429,634-18,439,552 | - | C1H4g09671 | CX4g032013 | LOC_Os04g35420 | Os04g0433800 | OsRecQl4 | Detail |
| C2H4g24266 | 4:18,441,437-18,447,918 | - | C1H4g26209 | CX4g032480 | LOC_Os04g35430 | Os04g0433900 | - | Detail |
| C2H4g14516 | 4:18,458,990-18,462,658 | - | C1H4g16755 | CX4g036182 | LOC_Os04g35480 | Os04g0434300 | - | Detail |
| C2H4g03670 | 4:18,463,122-18,464,800 | + | C1H4g01137 | CX4g033477 | LOC_Os04g35490 | Os04g0434400 | - | Detail |
| C2H4g25515 | 4:18,468,880-18,469,746 | - | - | CX4g033142 | LOC_Os04g35500 | Os04g0434500 | - | Detail |
| C2H4g12666 | 4:18,479,928-18,491,060 | - | C1H4g18837 | CX4g033597 | LOC_Os04g35510 | Os04g0434600 | - | Detail |
| C2H4g00913 | 4:18,493,722-18,498,080 | - | C1H4g16208 | CX4g035656 | LOC_Os04g35520 | Os04g0434800 | OsAPX7, sAPX | Detail |
| C2H4g20243 | 4:18,501,386-18,506,382 | + | C1H4g09329 | CX4g035680 | LOC_Os04g35530 | Os04g0434900 | - | Detail |
| C2H4g06857 | 4:18,510,663-18,515,273 | + | C1H4g19761 | CX4g036436 | LOC_Os04g35540 | Os04g0435100 | - | Detail |
| C2H4g27190 | 4:18,518,883-18,534,264 | - | - | - | - | - | - | Detail |
| C2H4g24818 | 4:18,535,610-18,537,887 | - | C1H4g18209 | CX4g032696 | LOC_Os04g35560 | Os04g0435500 | - | Detail |
| C2H4g14359 | 4:18,551,659-18,556,886 | + | C1H4g19177 | CX4g035624 | LOC_Os04g35570 | Os04g0435700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029231 | 3:843,200-843,811 | + | C1H3g27090 | C2H3g30074 | LOC_Os03g05590 | Os03g0117900 | - | Detail |
| CX3g029442 | 3:849,672-853,246 | + | C1H3g15880 | C2H3g15234 | LOC_Os03g02660 | Os03g0118100 | - | Detail |
| CX3g026262 | 3:855,799-859,121 | + | C1H3g16233 | C2H3g07784 | LOC_Os03g02670 | Os03g0118200 | - | Detail |
| CX3g031203 | 3:862,599-865,694 | + | C1H3g13017 | C2H3g27804 | LOC_Os03g02680 | Os03g0118400 | - | Detail |
| CX3g030967 | 3:868,055-872,386 | + | C1H3g16154 | C2H3g24680 | LOC_Os03g02685 | Os03g0118600 | - | Detail |
| CX3g029478 | 3:874,050-876,714 | + | C1H3g29819 | C2H3g19778 | LOC_Os03g02700 | Os03g0118700 | - | Detail |
| CX3g028542 | 3:877,111-877,269 | - | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |
| CX3g027174 | 3:884,525-889,153 | + | C1H3g19576 | C2H3g12379 | LOC_Os03g02710 | Os03g0118800 | - | Detail |
| CX3g029720 | 3:890,720-893,219 | + | C1H3g18152 | C2H3g28095 | LOC_Os03g02720 | Os03g0118900 | - | Detail |
| CX3g029588 | 3:894,254-896,037 | - | C1H3g09297 | C2H3g05533 | LOC_Os03g02730 | Os03g0119000 | - | Detail |
| CX3g029171 | 3:898,676-902,577 | - | C1H3g07728 | C2H3g14532 | LOC_Os03g02740 | Os03g0119100 | - | Detail |
| CX3g030706 | 3:905,867-908,119 | - | C1H3g23288 | C2H3g09524 | LOC_Os03g02750 | Os03g0119300 | - | Detail |
| CX3g026127 | 3:915,346-915,675 | + | - | - | - | - | - | Detail |
| CX3g026966 | 3:919,098-919,370 | - | - | - | - | - | - | Detail |
| CX3g030646 | 3:920,557-948,748 | + | C1H3g00618 | C2H3g19502 | LOC_Os03g03610 | Os03g0119500 | CRR1 | Detail |
| CX3g025079 | 3:949,846-951,105 | + | C1H3g23255 | C2H3g11241 | LOC_Os03g02762 | Os03g0119700 | - | Detail |
| CX3g028433 | 3:953,335-953,646 | + | C1H3g13459 | C2H3g05811 | LOC_Os03g02780 | Os03g0119900 | - | Detail |
| CX3g026456 | 3:962,201-966,152 | + | C1H3g04574 | C2H3g00993 | LOC_Os03g02800 | Os03g0119966 | RIM1, ONAC054, ONAC54, NAC54 | Detail |
| CX3g031103 | 3:972,205-973,968 | - | C1H3g16632 | C2H3g12012 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| CX3g026078 | 3:975,748-979,248 | - | C1H3g08934 | C2H3g14284 | LOC_Os03g02840 | Os03g0120200 | - | Detail |