| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g03864 | 4:17,871,628-17,873,686 | + | C1H4g24085 | CX4g035191 | LOC_Os04g34580 | Os04g0423100 | - | Detail |
| C2H4g17951 | 4:17,879,303-17,880,593 | - | C1H4g00658 | CX4g036598 | LOC_Os04g34600 | Os04g0423400 | - | Detail |
| C2H4g22006 | 4:17,890,980-17,894,847 | - | C1H4g11899 | - | LOC_Os04g34610 | Os04g0423600 | - | Detail |
| C2H4g00874 | 4:17,895,798-17,898,626 | - | C1H4g15226 | CX4g033739 | LOC_Os04g34620 | Os04g0423700 | - | Detail |
| C2H4g03351 | 4:17,908,155-17,914,582 | + | C1H4g04108 | CX4g034218 | LOC_Os04g34670 | Os04g0424200 | OsDNA2_17 | Detail |
| C2H4g04488 | 4:17,923,184-17,934,131 | + | C1H4g29348 | CX4g036298 | LOC_Os04g34720 | Os04g0425100 | - | Detail |
| C2H4g00219 | 4:18,080,336-18,084,525 | - | C1H4g11803 | CX4g033205 | LOC_Os04g34930 | Os04g0428900 | - | Detail |
| C2H4g00750 | 4:18,086,479-18,086,956 | + | - | - | - | - | - | Detail |
| C2H4g26513 | 4:18,093,620-18,097,339 | - | C1H4g21640 | CX4g034835 | LOC_Os04g34940 | Os04g0428950 | - | Detail |
| C2H4g12069 | 4:18,104,574-18,105,341 | - | C1H4g19022 | CX4g033075 | LOC_Os04g34970 | Os04g0429050 | - | Detail |
| C2H4g26187 | 4:18,114,199-18,119,077 | + | C1H4g13260 | CX4g034286 | LOC_Os04g34976 | Os04g0429100 | OsSET19, SDG708 | Detail |
| C2H4g07693 | 4:18,120,597-18,124,915 | + | C1H4g08749 | CX4g032065 | LOC_Os04g34984 | Os04g0429200 | - | Detail |
| C2H4g22507 | 4:18,128,308-18,130,484 | + | C1H4g29079 | CX4g035546 | LOC_Os04g35000 | Os04g0429300 | - | Detail |
| C2H4g06383 | 4:18,133,318-18,135,969 | + | C1H4g16663 | CX4g034846 | LOC_Os04g35010 | Os04g0429400 | - | Detail |
| C2H4g12633 | 4:18,136,330-18,140,119 | - | C1H4g22025 | CX4g036089 | LOC_Os04g35020 | Os04g0429500 | OsCSLH2 | Detail |
| C2H4g11608 | 4:18,142,876-18,148,234 | - | C1H4g20886 | CX4g036148 | LOC_Os04g35030 | Os04g0429600 | OsCSLH3 | Detail |
| C2H4g05154 | 4:18,179,492-18,186,937 | + | C1H4g07556 | CX4g035578 | LOC_Os04g35060 | Os04g0429800 | - | Detail |
| C2H4g06183 | 4:18,189,233-18,191,460 | + | - | CX4g031764 | - | Os04g0429900 | - | Detail |
| C2H4g17424 | 4:18,193,204-18,196,081 | + | C1H4g15837 | CX4g032788 | LOC_Os04g35080 | Os04g0430000 | - | Detail |
| C2H4g03094 | 4:18,199,297-18,201,801 | + | C1H4g08281 | CX2g020503 | LOC_Os04g35090 | Os04g0430100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029231 | 3:843,200-843,811 | + | C1H3g27090 | C2H3g30074 | LOC_Os03g05590 | Os03g0117900 | - | Detail |
| CX3g029442 | 3:849,672-853,246 | + | C1H3g15880 | C2H3g15234 | LOC_Os03g02660 | Os03g0118100 | - | Detail |
| CX3g026262 | 3:855,799-859,121 | + | C1H3g16233 | C2H3g07784 | LOC_Os03g02670 | Os03g0118200 | - | Detail |
| CX3g031203 | 3:862,599-865,694 | + | C1H3g13017 | C2H3g27804 | LOC_Os03g02680 | Os03g0118400 | - | Detail |
| CX3g030967 | 3:868,055-872,386 | + | C1H3g16154 | C2H3g24680 | LOC_Os03g02685 | Os03g0118600 | - | Detail |
| CX3g029478 | 3:874,050-876,714 | + | C1H3g29819 | C2H3g19778 | LOC_Os03g02700 | Os03g0118700 | - | Detail |
| CX3g028542 | 3:877,111-877,269 | - | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |
| CX3g027174 | 3:884,525-889,153 | + | C1H3g19576 | C2H3g12379 | LOC_Os03g02710 | Os03g0118800 | - | Detail |
| CX3g029720 | 3:890,720-893,219 | + | C1H3g18152 | C2H3g28095 | LOC_Os03g02720 | Os03g0118900 | - | Detail |
| CX3g029588 | 3:894,254-896,037 | - | C1H3g09297 | C2H3g05533 | LOC_Os03g02730 | Os03g0119000 | - | Detail |
| CX3g029171 | 3:898,676-902,577 | - | C1H3g07728 | C2H3g14532 | LOC_Os03g02740 | Os03g0119100 | - | Detail |
| CX3g030706 | 3:905,867-908,119 | - | C1H3g23288 | C2H3g09524 | LOC_Os03g02750 | Os03g0119300 | - | Detail |
| CX3g026127 | 3:915,346-915,675 | + | - | - | - | - | - | Detail |
| CX3g026966 | 3:919,098-919,370 | - | - | - | - | - | - | Detail |
| CX3g030646 | 3:920,557-948,748 | + | C1H3g00618 | C2H3g19502 | LOC_Os03g03610 | Os03g0119500 | CRR1 | Detail |
| CX3g025079 | 3:949,846-951,105 | + | C1H3g23255 | C2H3g11241 | LOC_Os03g02762 | Os03g0119700 | - | Detail |
| CX3g028433 | 3:953,335-953,646 | + | C1H3g13459 | C2H3g05811 | LOC_Os03g02780 | Os03g0119900 | - | Detail |
| CX3g026456 | 3:962,201-966,152 | + | C1H3g04574 | C2H3g00993 | LOC_Os03g02800 | Os03g0119966 | RIM1, ONAC054, ONAC54, NAC54 | Detail |
| CX3g031103 | 3:972,205-973,968 | - | C1H3g16632 | C2H3g12012 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| CX3g026078 | 3:975,748-979,248 | - | C1H3g08934 | C2H3g14284 | LOC_Os03g02840 | Os03g0120200 | - | Detail |