| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24528 | 2:32,368,038-32,371,612 | - | C1H2g20704 | - | - | - | - | Detail |
| C2H2g16616 | 2:32,395,053-32,396,749 | + | C1H2g05731 | - | LOC_Os02g58050 | - | - | Detail |
| C2H2g18185 | 2:32,402,650-32,404,781 | + | C1H2g13111 | CX2g019486 | LOC_Os02g58070 | - | - | Detail |
| C2H2g14679 | 2:32,406,125-32,410,837 | + | C1H2g01779 | CX2g024299 | LOC_Os02g58080 | Os02g0576600 | OsSUT5Z, OsSUT5 | Detail |
| C2H2g12823 | 2:32,411,370-32,416,448 | + | C1H2g14203 | CX2g021389 | LOC_Os02g58090 | Os02g0827300 | - | Detail |
| C2H2g07859 | 2:32,417,177-32,418,740 | + | C1H2g17767 | CX2g020312 | LOC_Os02g58100 | Os02g0827400 | - | Detail |
| C2H2g08276 | 2:32,420,230-32,425,253 | + | C1H2g25555 | CX2g020655 | LOC_Os02g58110 | Os02g0827500 | - | Detail |
| C2H2g01186 | 2:32,425,713-32,428,063 | - | C1H2g25769 | CX2g024804 | LOC_Os02g58120 | Os02g0827600 | - | Detail |
| C2H2g13358 | 2:32,428,318-32,431,662 | - | C1H2g25769 | CX2g021298 | LOC_Os02g57800 | Os02g0824000 | - | Detail |
| C2H2g14142 | 2:32,432,205-32,434,272 | - | - | CX2g019001 | LOC_Os02g58139 | Os02g0827900 | - | Detail |
| C2H2g22309 | 2:32,434,966-32,438,335 | - | C1H2g29575 | CX2g020130 | LOC_Os02g58160 | Os02g0828100 | - | Detail |
| C2H2g24086 | 2:32,440,314-32,442,421 | + | C1H2g09988 | CX2g022711 | LOC_Os02g58150 | Os02g0828200 | - | Detail |
| C2H2g01735 | 2:32,446,072-32,447,331 | + | C1H2g12011 | CX2g024386 | LOC_Os02g58170 | Os02g0828500 | - | Detail |
| C2H2g29730 | 2:32,460,220-32,460,939 | - | - | CX2g024569 | LOC_Os02g42380 | Os02g0828566 | - | Detail |
| C2H2g19009 | 2:32,471,999-32,472,214 | - | - | CX2g020307 | LOC_Os02g58200 | Os02g0828800 | - | Detail |
| C2H2g21040 | 2:32,473,642-32,480,326 | + | C1H2g26132 | CX2g022618 | LOC_Os02g58210 | Os02g0828900 | - | Detail |
| C2H2g26830 | 2:32,491,864-32,494,243 | - | C1H2g13644 | CX2g022289 | LOC_Os02g58220 | Os02g0829100 | OsRPA2, OsRPA32 | Detail |
| C2H2g22612 | 2:32,497,332-32,502,477 | - | C1H2g17512 | CX2g024162 | LOC_Os02g58230 | Os02g0829200 | - | Detail |
| C2H2g08873 | 2:32,503,908-32,507,407 | + | C1H2g22040 | CX2g021877 | LOC_Os02g58250 | Os02g0829400 | - | Detail |
| C2H2g06590 | 2:32,508,068-32,510,687 | - | C1H2g19670 | CX2g020227 | LOC_Os02g58260 | Os02g0829500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029231 | 3:843,200-843,811 | + | C1H3g27090 | C2H3g30074 | LOC_Os03g05590 | Os03g0117900 | - | Detail |
| CX3g029442 | 3:849,672-853,246 | + | C1H3g15880 | C2H3g15234 | LOC_Os03g02660 | Os03g0118100 | - | Detail |
| CX3g026262 | 3:855,799-859,121 | + | C1H3g16233 | C2H3g07784 | LOC_Os03g02670 | Os03g0118200 | - | Detail |
| CX3g031203 | 3:862,599-865,694 | + | C1H3g13017 | C2H3g27804 | LOC_Os03g02680 | Os03g0118400 | - | Detail |
| CX3g030967 | 3:868,055-872,386 | + | C1H3g16154 | C2H3g24680 | LOC_Os03g02685 | Os03g0118600 | - | Detail |
| CX3g029478 | 3:874,050-876,714 | + | C1H3g29819 | C2H3g19778 | LOC_Os03g02700 | Os03g0118700 | - | Detail |
| CX3g028542 | 3:877,111-877,269 | - | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |
| CX3g027174 | 3:884,525-889,153 | + | C1H3g19576 | C2H3g12379 | LOC_Os03g02710 | Os03g0118800 | - | Detail |
| CX3g029720 | 3:890,720-893,219 | + | C1H3g18152 | C2H3g28095 | LOC_Os03g02720 | Os03g0118900 | - | Detail |
| CX3g029588 | 3:894,254-896,037 | - | C1H3g09297 | C2H3g05533 | LOC_Os03g02730 | Os03g0119000 | - | Detail |
| CX3g029171 | 3:898,676-902,577 | - | C1H3g07728 | C2H3g14532 | LOC_Os03g02740 | Os03g0119100 | - | Detail |
| CX3g030706 | 3:905,867-908,119 | - | C1H3g23288 | C2H3g09524 | LOC_Os03g02750 | Os03g0119300 | - | Detail |
| CX3g026127 | 3:915,346-915,675 | + | - | - | - | - | - | Detail |
| CX3g026966 | 3:919,098-919,370 | - | - | - | - | - | - | Detail |
| CX3g030646 | 3:920,557-948,748 | + | C1H3g00618 | C2H3g19502 | LOC_Os03g03610 | Os03g0119500 | CRR1 | Detail |
| CX3g025079 | 3:949,846-951,105 | + | C1H3g23255 | C2H3g11241 | LOC_Os03g02762 | Os03g0119700 | - | Detail |
| CX3g028433 | 3:953,335-953,646 | + | C1H3g13459 | C2H3g05811 | LOC_Os03g02780 | Os03g0119900 | - | Detail |
| CX3g026456 | 3:962,201-966,152 | + | C1H3g04574 | C2H3g00993 | LOC_Os03g02800 | Os03g0119966 | RIM1, ONAC054, ONAC54, NAC54 | Detail |
| CX3g031103 | 3:972,205-973,968 | - | C1H3g16632 | C2H3g12012 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| CX3g026078 | 3:975,748-979,248 | - | C1H3g08934 | C2H3g14284 | LOC_Os03g02840 | Os03g0120200 | - | Detail |