| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g07612 | 12:1,624,927-1,627,391 | - | C2H12g07745 | CX12g017796 | LOC_Os12g04160 | Os12g0135900 | - | Detail |
| C1H12g15908 | 12:1,634,200-1,637,429 | + | C2H12g11889 | CX12g016479 | LOC_Os12g04180 | Os12g0136200 | - | Detail |
| C1H12g23258 | 12:1,639,839-1,640,494 | - | C2H11g24596 | - | - | - | - | Detail |
| C1H12g12861 | 12:1,640,608-1,642,015 | - | C2H12g10790 | - | - | Os11g0139550 | - | Detail |
| C1H12g07242 | 12:1,642,031-1,642,739 | - | C2H12g27970 | - | - | Os12g0136300 | - | Detail |
| C1H12g11454 | 12:1,652,829-1,658,912 | - | C2H12g09437 | CX12g017709 | LOC_Os11g04420 | Os11g0139900 | - | Detail |
| C1H12g29999 | 12:1,660,866-1,662,572 | - | C2H12g00717 | CX11g013028 | LOC_Os12g04210 | Os11g0139900 | - | Detail |
| C1H12g24298 | 12:1,664,510-1,665,047 | - | C2H12g07042 | CX12g017945 | LOC_Os12g04210 | Os12g0136600 | - | Detail |
| C1H12g28355 | 12:1,665,882-1,672,525 | + | C2H12g25478 | CX12g018408 | LOC_Os12g04220 | Os12g0136900 | - | Detail |
| C1H12g30611 | 12:1,677,734-1,680,477 | - | C2H12g16637 | CX12g016318 | LOC_Os12g04240 | Os12g0137100 | - | Detail |
| C1H12g30370 | 12:1,684,690-1,688,584 | + | C2H12g14263 | CX12g018417 | LOC_Os12g04260 | Os12g0137200 | - | Detail |
| C1H12g23515 | 12:1,688,853-1,692,226 | - | C2H12g25110 | CX12g016382 | LOC_Os12g04270 | Os12g0137300 | - | Detail |
| C1H12g19285 | 12:1,699,784-1,703,618 | + | C2H12g13621 | CX12g015056 | LOC_Os12g04290 | Os12g0137500 | - | Detail |
| C1H12g17056 | 12:1,704,285-1,705,109 | - | C2H12g02518 | CX12g017342 | LOC_Os12g04300 | Os12g0137600 | - | Detail |
| C1H12g06551 | 12:1,712,934-1,713,950 | - | C2H12g02518 | CX12g016430 | LOC_Os12g04350 | Os12g0137700 | - | Detail |
| C1H12g16466 | 12:1,720,232-1,721,528 | - | - | CX12g015111 | - | - | - | Detail |
| C1H12g18257 | 12:1,728,683-1,734,174 | - | C2H12g08235 | CX12g015181 | LOC_Os12g04370 | Os12g0138100 | - | Detail |
| C1H12g23438 | 12:1,730,274-1,732,383 | + | - | - | - | - | - | Detail |
| C1H12g03320 | 12:1,749,341-1,751,789 | + | C2H12g06655 | CX12g017048 | LOC_Os12g04410 | Os12g0138500 | OsBOP3, NH5 | Detail |
| C1H12g29309 | 12:1,761,447-1,761,975 | + | C2H12g17563 | CX12g018607 | LOC_Os12g06020 | Os12g0138700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029231 | 3:843,200-843,811 | + | C1H3g27090 | C2H3g30074 | LOC_Os03g05590 | Os03g0117900 | - | Detail |
| CX3g029442 | 3:849,672-853,246 | + | C1H3g15880 | C2H3g15234 | LOC_Os03g02660 | Os03g0118100 | - | Detail |
| CX3g026262 | 3:855,799-859,121 | + | C1H3g16233 | C2H3g07784 | LOC_Os03g02670 | Os03g0118200 | - | Detail |
| CX3g031203 | 3:862,599-865,694 | + | C1H3g13017 | C2H3g27804 | LOC_Os03g02680 | Os03g0118400 | - | Detail |
| CX3g030967 | 3:868,055-872,386 | + | C1H3g16154 | C2H3g24680 | LOC_Os03g02685 | Os03g0118600 | - | Detail |
| CX3g029478 | 3:874,050-876,714 | + | C1H3g29819 | C2H3g19778 | LOC_Os03g02700 | Os03g0118700 | - | Detail |
| CX3g028542 | 3:877,111-877,269 | - | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |
| CX3g027174 | 3:884,525-889,153 | + | C1H3g19576 | C2H3g12379 | LOC_Os03g02710 | Os03g0118800 | - | Detail |
| CX3g029720 | 3:890,720-893,219 | + | C1H3g18152 | C2H3g28095 | LOC_Os03g02720 | Os03g0118900 | - | Detail |
| CX3g029588 | 3:894,254-896,037 | - | C1H3g09297 | C2H3g05533 | LOC_Os03g02730 | Os03g0119000 | - | Detail |
| CX3g029171 | 3:898,676-902,577 | - | C1H3g07728 | C2H3g14532 | LOC_Os03g02740 | Os03g0119100 | - | Detail |
| CX3g030706 | 3:905,867-908,119 | - | C1H3g23288 | C2H3g09524 | LOC_Os03g02750 | Os03g0119300 | - | Detail |
| CX3g026127 | 3:915,346-915,675 | + | - | - | - | - | - | Detail |
| CX3g026966 | 3:919,098-919,370 | - | - | - | - | - | - | Detail |
| CX3g030646 | 3:920,557-948,748 | + | C1H3g00618 | C2H3g19502 | LOC_Os03g03610 | Os03g0119500 | CRR1 | Detail |
| CX3g025079 | 3:949,846-951,105 | + | C1H3g23255 | C2H3g11241 | LOC_Os03g02762 | Os03g0119700 | - | Detail |
| CX3g028433 | 3:953,335-953,646 | + | C1H3g13459 | C2H3g05811 | LOC_Os03g02780 | Os03g0119900 | - | Detail |
| CX3g026456 | 3:962,201-966,152 | + | C1H3g04574 | C2H3g00993 | LOC_Os03g02800 | Os03g0119966 | RIM1, ONAC054, ONAC54, NAC54 | Detail |
| CX3g031103 | 3:972,205-973,968 | - | C1H3g16632 | C2H3g12012 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| CX3g026078 | 3:975,748-979,248 | - | C1H3g08934 | C2H3g14284 | LOC_Os03g02840 | Os03g0120200 | - | Detail |