| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g07925 | 9:4,475,655-4,488,861 | + | C2H9g26673 | CX9g056375 | LOC_Os09g09360 | Os09g0266400 | - | Detail |
| C1H9g19274 | 9:4,489,796-4,501,100 | - | C2H9g20971 | CX9g056600 | LOC_Os09g09370 | Os09g0266600 | - | Detail |
| C1H9g06763 | 9:4,540,131-4,547,720 | + | C2H9g28492 | CX9g055629 | LOC_Os09g09470 | Os09g0267500 | - | Detail |
| C1H9g16484 | 9:4,550,592-4,554,331 | + | C2H9g02970 | CX9g056945 | LOC_Os09g09480 | Os09g0267600 | - | Detail |
| C1H9g25249 | 9:4,641,218-4,644,708 | + | C2H9g18374 | - | - | - | - | Detail |
| C1H9g14847 | 9:4,686,001-4,688,229 | - | C2H9g21323 | CX9g056003 | LOC_Os09g09790 | Os09g0270900 | - | Detail |
| C1H9g28290 | 9:4,730,552-4,731,272 | - | C2H9g23545 | CX9g055328 | LOC_Os09g09830 | Os09g0271100 | OsHIPP21 | Detail |
| C1H9g21029 | 9:4,754,130-4,754,756 | - | C2H9g20381 | CX9g056914 | LOC_Os09g09850 | Os09g0271100 | OsHIPP21 | Detail |
| C1H9g26618 | 9:4,772,143-4,774,716 | - | C2H9g30468 | CX9g056996 | LOC_Os09g17930 | - | - | Detail |
| C1H9g25101 | 9:4,792,216-4,793,010 | - | C2H9g04956 | CX9g055564 | LOC_Os09g09930 | Os09g0272000 | OsHIPP17 | Detail |
| C1H9g04150 | 9:4,799,519-4,799,792 | - | - | - | - | - | - | Detail |
| C1H9g30109 | 9:4,800,817-4,801,381 | - | C2H9g29443 | - | - | - | - | Detail |
| C1H9g18393 | 9:4,816,449-4,818,962 | + | C2H9g08811 | CX9g057268 | LOC_Os09g09980 | Os09g0272300 | - | Detail |
| C1H9g26091 | 9:4,819,505-4,819,867 | - | C2H9g06730 | CX9g055161 | - | Os09g0272401 | - | Detail |
| C1H9g17105 | 9:4,823,136-4,826,779 | - | C2H9g24324 | CX9g055756 | LOC_Os09g10000 | Os09g0272500 | - | Detail |
| C1H9g19656 | 9:4,831,247-4,831,822 | + | C2H9g05170 | CX9g057482 | LOC_Os09g10010 | Os09g0272600 | - | Detail |
| C1H9g02886 | 9:4,850,975-4,852,021 | - | - | - | - | - | - | Detail |
| C1H9g21803 | 9:4,883,721-4,884,209 | - | C2H9g21933 | CX9g057777 | LOC_Os09g10200 | Os09g0273800 | - | Detail |
| C1H9g13280 | 9:4,915,697-4,916,185 | - | C2H9g21933 | CX9g057777 | LOC_Os09g10200 | Os09g0273800 | - | Detail |
| C1H9g25335 | 9:4,942,549-4,943,037 | - | C2H9g21933 | CX9g057777 | LOC_Os09g10200 | Os09g0273800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029231 | 3:843,200-843,811 | + | C1H3g27090 | C2H3g30074 | LOC_Os03g05590 | Os03g0117900 | - | Detail |
| CX3g029442 | 3:849,672-853,246 | + | C1H3g15880 | C2H3g15234 | LOC_Os03g02660 | Os03g0118100 | - | Detail |
| CX3g026262 | 3:855,799-859,121 | + | C1H3g16233 | C2H3g07784 | LOC_Os03g02670 | Os03g0118200 | - | Detail |
| CX3g031203 | 3:862,599-865,694 | + | C1H3g13017 | C2H3g27804 | LOC_Os03g02680 | Os03g0118400 | - | Detail |
| CX3g030967 | 3:868,055-872,386 | + | C1H3g16154 | C2H3g24680 | LOC_Os03g02685 | Os03g0118600 | - | Detail |
| CX3g029478 | 3:874,050-876,714 | + | C1H3g29819 | C2H3g19778 | LOC_Os03g02700 | Os03g0118700 | - | Detail |
| CX3g028542 | 3:877,111-877,269 | - | - | C2H6g20372 | LOC_Os05g42448 | Os11g0631825 | - | Detail |
| CX3g027174 | 3:884,525-889,153 | + | C1H3g19576 | C2H3g12379 | LOC_Os03g02710 | Os03g0118800 | - | Detail |
| CX3g029720 | 3:890,720-893,219 | + | C1H3g18152 | C2H3g28095 | LOC_Os03g02720 | Os03g0118900 | - | Detail |
| CX3g029588 | 3:894,254-896,037 | - | C1H3g09297 | C2H3g05533 | LOC_Os03g02730 | Os03g0119000 | - | Detail |
| CX3g029171 | 3:898,676-902,577 | - | C1H3g07728 | C2H3g14532 | LOC_Os03g02740 | Os03g0119100 | - | Detail |
| CX3g030706 | 3:905,867-908,119 | - | C1H3g23288 | C2H3g09524 | LOC_Os03g02750 | Os03g0119300 | - | Detail |
| CX3g026127 | 3:915,346-915,675 | + | - | - | - | - | - | Detail |
| CX3g026966 | 3:919,098-919,370 | - | - | - | - | - | - | Detail |
| CX3g030646 | 3:920,557-948,748 | + | C1H3g00618 | C2H3g19502 | LOC_Os03g03610 | Os03g0119500 | CRR1 | Detail |
| CX3g025079 | 3:949,846-951,105 | + | C1H3g23255 | C2H3g11241 | LOC_Os03g02762 | Os03g0119700 | - | Detail |
| CX3g028433 | 3:953,335-953,646 | + | C1H3g13459 | C2H3g05811 | LOC_Os03g02780 | Os03g0119900 | - | Detail |
| CX3g026456 | 3:962,201-966,152 | + | C1H3g04574 | C2H3g00993 | LOC_Os03g02800 | Os03g0119966 | RIM1, ONAC054, ONAC54, NAC54 | Detail |
| CX3g031103 | 3:972,205-973,968 | - | C1H3g16632 | C2H3g12012 | LOC_Os03g02830 | Os03g0120100 | - | Detail |
| CX3g026078 | 3:975,748-979,248 | - | C1H3g08934 | C2H3g14284 | LOC_Os03g02840 | Os03g0120200 | - | Detail |