| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g17694 | 5:1,387,037-1,392,794 | - | C2H5g16712 | CX5g039622 | LOC_Os05g03640 | Os05g0127500 | - | Detail |
| C1H5g12303 | 5:1,415,004-1,416,476 | + | C2H5g05001 | CX5g040566 | LOC_Os05g03750 | Os05g0128100 | - | Detail |
| C1H5g14002 | 5:1,429,621-1,431,545 | - | C2H5g10735 | CX5g039214 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| C1H5g27203 | 5:1,437,526-1,440,847 | - | C2H5g15512 | CX5g038112 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| C1H5g26071 | 5:1,450,527-1,454,746 | + | C2H5g12644 | CX5g037779 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| C1H5g17726 | 5:1,457,853-1,459,708 | + | C2H5g20670 | CX5g036800 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| C1H5g20738 | 5:1,460,007-1,462,175 | - | C2H5g08741 | CX5g040768 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| C1H5g14331 | 5:1,494,591-1,500,309 | - | C2H5g24745 | CX5g038179 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| C1H5g16799 | 5:1,506,515-1,508,333 | - | C2H5g23667 | - | - | - | - | Detail |
| C1H5g11198 | 5:1,513,727-1,514,565 | + | C2H5g10940 | CX5g037909 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| C1H5g15292 | 5:1,515,259-1,519,290 | - | C2H5g13765 | CX5g038918 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| C1H5g09306 | 5:1,522,797-1,526,818 | + | C2H5g20349 | CX5g036768 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| C1H5g02682 | 5:1,541,276-1,542,253 | - | C2H5g13879 | - | - | - | - | Detail |
| C1H5g31896 | 5:1,558,184-1,566,344 | - | C2H5g28718 | CX5g040404 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| C1H5g15210 | 5:1,573,177-1,573,586 | - | C2H5g08536 | - | - | Os05g0130500 | - | Detail |
| C1H5g13927 | 5:1,578,202-1,582,694 | - | C2H5g17204 | CX5g040242 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| C1H5g19982 | 5:1,584,559-1,585,021 | + | C2H5g23034 | CX5g038388 | - | - | - | Detail |
| C1H5g21167 | 5:1,586,510-1,587,802 | + | C2H5g10179 | - | - | - | - | Detail |
| C1H5g11003 | 5:1,594,377-1,596,806 | - | C2H5g12456 | - | LOC_Os05g04070 | Os05g0131100 | - | Detail |
| C1H5g23202 | 5:1,599,408-1,603,800 | - | C2H5g08847 | - | LOC_Os05g04110 | Os05g0131401 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025559 | 3:603,940-605,126 | - | C1H3g14295 | C2H3g13014 | LOC_Os03g02190 | Os03g0113000 | - | Detail |
| CX3g028290 | 3:607,582-610,474 | + | C1H3g06676 | C2H3g22975 | LOC_Os03g02200 | Os03g0113100 | - | Detail |
| CX3g026697 | 3:611,547-613,942 | + | C1H3g29988 | C2H3g07317 | LOC_Os03g02210 | Os03g0113200 | - | Detail |
| CX3g028541 | 3:623,655-626,687 | - | C1H3g08654 | C2H3g26703 | LOC_Os03g02240 | Os10g0516500 | - | Detail |
| CX3g030286 | 3:633,422-633,846 | - | C1H10g20038 | C2H10g26484 | LOC_Os03g02255 | Os10g0516900 | - | Detail |
| CX3g027292 | 3:638,492-642,509 | - | C1H3g00977 | C2H3g21122 | LOC_Os03g02260 | Os03g0113700 | - | Detail |
| CX3g030810 | 3:642,928-648,103 | + | C1H3g24927 | C2H3g16661 | LOC_Os03g02270 | Os03g0113800 | - | Detail |
| CX3g028218 | 3:653,566-654,162 | + | C1H3g15339 | C2H3g07262 | LOC_Os03g02280 | Os03g0113900 | OsS40-4 | Detail |
| CX3g027517 | 3:657,658-663,825 | + | C1H3g18554 | C2H3g09613 | LOC_Os03g02290 | Os03g0114000 | - | Detail |
| CX3g025737 | 3:665,127-665,852 | + | C1H3g18461 | C2H3g23619 | LOC_Os03g02300 | Os03g0114100 | - | Detail |
| CX3g030259 | 3:667,135-668,705 | - | C1H3g30974 | C2H3g25616 | LOC_Os03g02310 | Os03g0114200 | - | Detail |
| CX3g028339 | 3:670,780-679,366 | + | C1H3g18565 | C2H3g01746 | LOC_Os03g02320 | Os03g0114300 | - | Detail |
| CX3g029614 | 3:682,889-684,448 | - | C1H3g10649 | C2H3g18646 | LOC_Os03g02330 | Os03g0114400 | - | Detail |
| CX3g029067 | 3:689,484-690,168 | + | - | - | - | - | - | Detail |
| CX3g029549 | 3:697,456-698,880 | - | C1H3g21481 | C2H3g14633 | LOC_Os11g13920 | - | - | Detail |
| CX3g027583 | 3:716,660-719,948 | + | C1H3g22597 | C2H3g04046 | LOC_Os03g02380 | Os03g0114800 | - | Detail |
| CX3g025748 | 3:722,353-722,937 | - | C1H3g14435 | C2H3g22633 | LOC_Os03g02390 | Os03g0114900 | - | Detail |
| CX3g030673 | 3:724,458-725,449 | + | C1H3g27376 | C2H3g26464 | LOC_Os03g02400 | Os03g0115000 | - | Detail |
| CX3g029693 | 3:726,394-731,001 | - | C1H3g17339 | C2H3g20722 | LOC_Os03g02410 | Os03g0115100 | - | Detail |
| CX3g027454 | 3:732,423-733,950 | - | C1H3g13483 | C2H3g13923 | LOC_Os03g02420 | Os03g0115200 | - | Detail |