| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g12560 | 4:20,600,739-20,602,337 | - | C1H4g22165 | CX4g031850 | LOC_Os04g40130 | Os04g0477200 | - | Detail |
| C2H4g28888 | 4:20,602,953-20,606,559 | - | C1H4g22165 | CX4g031850 | LOC_Os04g40140 | Os04g0477300 | BET1 | Detail |
| C2H4g16963 | 4:20,610,602-20,613,536 | - | C1H4g04341 | CX4g035932 | LOC_Os04g40150 | Os04g0477500 | - | Detail |
| C2H4g03853 | 4:20,624,022-20,625,104 | + | C1H4g30761 | CX4g032211 | LOC_Os04g40180 | Os04g0477900 | - | Detail |
| C2H4g11207 | 4:20,631,624-20,635,900 | + | C1H4g19712 | CX4g035771 | LOC_Os04g40290 | Os04g0479000 | CRC1 | Detail |
| C2H4g19162 | 4:20,636,375-20,639,550 | - | C1H4g01004 | CX4g036544 | LOC_Os04g40300 | Os04g0479100 | - | Detail |
| C2H4g07894 | 4:20,640,532-20,643,901 | - | C1H4g10287 | CX4g033124 | LOC_Os04g40310 | Os04g0479200 | - | Detail |
| C2H4g17535 | 4:20,645,729-20,648,711 | - | C1H4g28704 | CX4g033414 | LOC_Os04g40320 | Os04g0479300 | - | Detail |
| C2H4g20158 | 4:20,651,176-20,652,357 | + | - | CX4g034851 | LOC_Os04g40380 | Os04g0479900 | - | Detail |
| C2H4g08628 | 4:20,656,870-20,659,749 | - | C1H4g05029 | CX4g035703 | LOC_Os04g40330 | Os04g0479500 | - | Detail |
| C2H4g04586 | 4:20,663,044-20,666,634 | + | C1H4g29506 | CX4g034298 | LOC_Os04g40370 | Os04g0479800 | - | Detail |
| C2H4g28967 | 4:20,669,680-20,671,421 | - | C1H4g07932 | CX4g035464 | LOC_Os04g40380 | Os04g0479900 | - | Detail |
| C2H4g22198 | 4:20,676,596-20,679,902 | + | C1H4g02326 | CX4g032128 | LOC_Os04g40400 | Os04g0480100 | - | Detail |
| C2H4g13593 | 4:20,682,008-20,683,004 | - | C1H4g02234 | CX4g035970 | LOC_Os04g40410 | Os04g0480200 | OsNAR2.2 | Detail |
| C2H4g10651 | 4:20,684,116-20,688,570 | + | C1H4g08203 | CX4g031651 | LOC_Os04g40420 | Os04g0480300 | - | Detail |
| C2H4g01241 | 4:20,689,614-20,692,183 | + | C1H4g03377 | CX4g032839 | LOC_Os04g40430 | Os04g0480400 | - | Detail |
| C2H4g02108 | 4:20,693,005-20,694,419 | + | C1H4g22344 | CX4g034579 | LOC_Os04g40440 | Os04g0480500 | - | Detail |
| C2H4g13724 | 4:20,694,866-20,696,338 | + | C1H4g22344 | CX4g034579 | LOC_Os04g40440 | Os04g0480500 | - | Detail |
| C2H4g07141 | 4:20,698,444-20,701,214 | - | C1H4g02669 | CX4g035688 | LOC_Os04g40460 | Os04g0480650 | - | Detail |
| C2H4g11277 | 4:20,703,023-20,704,561 | - | C1H4g10999 | CX4g035795 | LOC_Os04g40475 | Os04g0480802 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029772 | 3:472,972-474,839 | + | C1H3g22432 | C2H3g24553 | LOC_Os03g02020 | Os03g0110900 | - | Detail |
| CX3g026287 | 3:476,109-476,360 | - | - | - | - | Os03g0111000 | - | Detail |
| CX3g026446 | 3:477,347-481,959 | - | C1H3g02926 | C2H3g02060 | LOC_Os03g02030 | Os03g0111100 | - | Detail |
| CX3g031029 | 3:483,696-485,925 | - | C1H3g26294 | C2H3g10416 | LOC_Os03g02040 | Os03g0111200 | - | Detail |
| CX3g030230 | 3:489,039-489,335 | - | C1H3g15608 | C2H3g28715 | LOC_Os03g02050 | Os03g0111300 | - | Detail |
| CX3g026627 | 3:496,010-499,016 | - | C1H3g30842 | C2H3g08607 | LOC_Os03g02070 | Os03g0111400 | - | Detail |
| CX3g026803 | 3:506,595-507,240 | + | C1H3g12626 | C2H3g00134 | LOC_Os03g21740 | Os03g0111700 | - | Detail |
| CX3g029357 | 3:507,693-510,725 | + | C1H3g17498 | - | LOC_Os03g21600 | Os03g0333800 | - | Detail |
| CX3g029370 | 3:515,319-515,615 | - | - | - | - | Os10g0516250 | - | Detail |
| CX3g026774 | 3:521,747-523,112 | - | C1H3g02748 | - | - | - | - | Detail |
| CX3g028405 | 3:524,229-526,002 | - | C1H3g02748 | C2H3g30326 | - | - | - | Detail |
| CX3g030313 | 3:537,104-539,235 | + | C1H3g18662 | - | LOC_Os03g02080 | Os03g0111500 | - | Detail |
| CX3g030989 | 3:542,579-548,601 | - | C1H3g03993 | C2H3g23362 | LOC_Os03g02090 | Os03g0111600 | - | Detail |
| CX3g029050 | 3:549,717-555,646 | + | C1H3g29372 | C2H3g00134 | LOC_Os03g02100 | Os03g0694900 | - | Detail |
| CX3g028048 | 3:557,757-564,226 | + | C1H3g12244 | C2H3g12317 | LOC_Os03g02110 | Os03g0111800 | - | Detail |
| CX3g026996 | 3:567,625-576,486 | + | C1H3g07282 | C2H3g29148 | LOC_Os03g02150 | Os03g0112101 | - | Detail |
| CX3g029929 | 3:580,861-588,744 | + | C1H3g30522 | C2H3g00838 | LOC_Os03g02160 | Os03g0112700 | EHD4, OsC3H20, C3H20, Ehd4 | Detail |
| CX3g030050 | 3:590,160-594,055 | - | C1H3g07238 | C2H3g27881 | LOC_Os03g02170 | Os03g0112800 | STS1 | Detail |
| CX3g030634 | 3:594,768-596,405 | - | C1H3g09620 | C2H3g26177 | LOC_Os03g02180 | Os03g0112900 | OsF5HL2 | Detail |
| CX3g025594 | 3:600,580-600,822 | - | - | - | - | Os11g0474000 | - | Detail |