| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g23950 | 2:932,509-933,752 | + | C1H2g05218 | CX2g019852 | LOC_Os02g02790 | Os02g0120200 | - | Detail |
| C2H2g18396 | 2:933,964-935,769 | + | C1H2g06793 | CX2g021508 | - | - | - | Detail |
| C2H2g22908 | 2:938,243-939,996 | + | C1H2g16504 | CX2g022200 | LOC_Os02g02800 | Os02g0120300 | - | Detail |
| C2H2g06131 | 2:940,831-943,472 | - | C1H2g31187 | CX2g021438 | LOC_Os02g02810 | Os02g0120400 | - | Detail |
| C2H2g24669 | 2:944,377-946,782 | - | C1H2g13371 | CX2g021950 | LOC_Os02g02820 | Os02g0120500 | - | Detail |
| C2H2g23195 | 2:949,130-949,928 | + | C1H2g11370 | CX2g024125 | LOC_Os02g02830 | Os02g0120600 | - | Detail |
| C2H2g05461 | 2:951,157-954,711 | - | C1H2g15098 | CX2g021575 | LOC_Os02g02840 | Os02g0120800 | - | Detail |
| C2H2g14252 | 2:956,580-960,016 | - | C1H2g13102 | CX2g019479 | LOC_Os02g02850 | Os02g0120900 | - | Detail |
| C2H2g04776 | 2:960,560-965,483 | - | C1H2g26353 | CX2g022058 | LOC_Os02g02860 | Os02g0121000 | OsGluRS, OsERS3, cde1(t) | Detail |
| C2H2g06057 | 2:974,234-980,075 | - | C1H2g14630 | CX2g022791 | LOC_Os02g02880 | Os02g0121200 | - | Detail |
| C2H2g00692 | 2:990,647-992,063 | - | C1H2g10216 | CX2g021732 | LOC_Os02g02900 | Os02g0121400 | - | Detail |
| C2H2g20864 | 2:992,782-999,522 | - | C1H2g15498 | CX2g020770 | LOC_Os02g02910 | Os02g0121500 | - | Detail |
| C2H2g07493 | 2:1,002,161-1,006,114 | + | C1H2g05573 | CX2g020376 | LOC_Os02g02920 | Os02g0747500 | - | Detail |
| C2H2g11739 | 2:1,023,980-1,028,620 | + | C1H2g17010 | CX2g021960 | LOC_Os02g02930 | Os02g0121700 | - | Detail |
| C2H2g29898 | 2:1,030,661-1,031,878 | + | C1H2g06823 | CX2g019921 | LOC_Os02g02940 | Os02g0121800 | - | Detail |
| C2H2g29743 | 2:1,035,776-1,037,556 | - | C1H2g00797 | CX2g019537 | LOC_Os02g02960 | Os02g0122000 | - | Detail |
| C2H2g28889 | 2:1,037,205-1,039,138 | + | C1H2g22434 | CX2g023478 | LOC_Os02g02970 | Os02g0122100 | - | Detail |
| C2H2g00858 | 2:1,040,657-1,042,135 | + | C1H2g22434 | CX2g023478 | LOC_Os02g02970 | Os02g0122100 | - | Detail |
| C2H2g12345 | 2:1,043,674-1,051,117 | - | C1H2g11681 | CX2g020160 | LOC_Os02g02980 | Os02g0122200 | - | Detail |
| C2H2g06396 | 2:1,051,794-1,054,663 | - | C1H2g13050 | CX2g019187 | LOC_Os02g02990 | Os02g0122300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029772 | 3:472,972-474,839 | + | C1H3g22432 | C2H3g24553 | LOC_Os03g02020 | Os03g0110900 | - | Detail |
| CX3g026287 | 3:476,109-476,360 | - | - | - | - | Os03g0111000 | - | Detail |
| CX3g026446 | 3:477,347-481,959 | - | C1H3g02926 | C2H3g02060 | LOC_Os03g02030 | Os03g0111100 | - | Detail |
| CX3g031029 | 3:483,696-485,925 | - | C1H3g26294 | C2H3g10416 | LOC_Os03g02040 | Os03g0111200 | - | Detail |
| CX3g030230 | 3:489,039-489,335 | - | C1H3g15608 | C2H3g28715 | LOC_Os03g02050 | Os03g0111300 | - | Detail |
| CX3g026627 | 3:496,010-499,016 | - | C1H3g30842 | C2H3g08607 | LOC_Os03g02070 | Os03g0111400 | - | Detail |
| CX3g026803 | 3:506,595-507,240 | + | C1H3g12626 | C2H3g00134 | LOC_Os03g21740 | Os03g0111700 | - | Detail |
| CX3g029357 | 3:507,693-510,725 | + | C1H3g17498 | - | LOC_Os03g21600 | Os03g0333800 | - | Detail |
| CX3g029370 | 3:515,319-515,615 | - | - | - | - | Os10g0516250 | - | Detail |
| CX3g026774 | 3:521,747-523,112 | - | C1H3g02748 | - | - | - | - | Detail |
| CX3g028405 | 3:524,229-526,002 | - | C1H3g02748 | C2H3g30326 | - | - | - | Detail |
| CX3g030313 | 3:537,104-539,235 | + | C1H3g18662 | - | LOC_Os03g02080 | Os03g0111500 | - | Detail |
| CX3g030989 | 3:542,579-548,601 | - | C1H3g03993 | C2H3g23362 | LOC_Os03g02090 | Os03g0111600 | - | Detail |
| CX3g029050 | 3:549,717-555,646 | + | C1H3g29372 | C2H3g00134 | LOC_Os03g02100 | Os03g0694900 | - | Detail |
| CX3g028048 | 3:557,757-564,226 | + | C1H3g12244 | C2H3g12317 | LOC_Os03g02110 | Os03g0111800 | - | Detail |
| CX3g026996 | 3:567,625-576,486 | + | C1H3g07282 | C2H3g29148 | LOC_Os03g02150 | Os03g0112101 | - | Detail |
| CX3g029929 | 3:580,861-588,744 | + | C1H3g30522 | C2H3g00838 | LOC_Os03g02160 | Os03g0112700 | EHD4, OsC3H20, C3H20, Ehd4 | Detail |
| CX3g030050 | 3:590,160-594,055 | - | C1H3g07238 | C2H3g27881 | LOC_Os03g02170 | Os03g0112800 | STS1 | Detail |
| CX3g030634 | 3:594,768-596,405 | - | C1H3g09620 | C2H3g26177 | LOC_Os03g02180 | Os03g0112900 | OsF5HL2 | Detail |
| CX3g025594 | 3:600,580-600,822 | - | - | - | - | Os11g0474000 | - | Detail |