| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g29067 | 3:29,881,308-29,882,118 | + | C2H3g12840 | CX3g028014 | LOC_Os03g56160 | Os03g0772600 | - | Detail |
| C1H3g22167 | 3:29,884,694-29,885,360 | + | C2H3g23317 | CX3g028800 | LOC_Os03g56130 | Os03g0669300 | - | Detail |
| C1H3g26236 | 3:29,891,223-29,896,116 | + | C2H3g12690 | CX3g025388 | LOC_Os03g56110 | Os03g0771500 | - | Detail |
| C1H3g06172 | 3:29,910,518-29,912,059 | + | C2H3g15287 | CX3g028141 | LOC_Os03g56190 | Os03g0772800 | - | Detail |
| C1H3g27520 | 3:29,931,113-29,937,034 | - | C2H3g23997 | CX3g029781 | LOC_Os03g56234 | Os03g0773100 | - | Detail |
| C1H3g12061 | 3:29,939,988-29,944,559 | - | C2H3g30456 | CX3g031131 | LOC_Os03g56250 | Os03g0773300 | - | Detail |
| C1H3g19745 | 3:29,955,768-29,963,615 | + | C2H3g15647 | CX3g027730 | LOC_Os03g56260 | Os03g0773600 | - | Detail |
| C1H3g13238 | 3:29,971,181-29,975,252 | + | C2H3g25453 | CX3g029516 | LOC_Os03g56270 | Os03g0773700 | - | Detail |
| C1H3g14912 | 3:29,978,851-29,982,138 | - | C2H3g25804 | CX3g025155 | LOC_Os03g56280 | Os03g0773800 | - | Detail |
| C1H3g03566 | 3:29,983,202-29,986,516 | - | C2H3g28843 | CX3g026775 | LOC_Os03g56300 | Os03g0774200 | - | Detail |
| C1H3g22996 | 3:29,987,527-29,994,806 | - | C2H3g04435 | CX3g031127 | LOC_Os03g56310 | Os03g0774300 | - | Detail |
| C1H3g19261 | 3:29,997,987-29,999,698 | + | C2H3g26015 | CX3g025412 | LOC_Os03g56320 | Os03g0774400 | - | Detail |
| C1H3g10204 | 3:30,014,437-30,015,072 | - | C2H3g25248 | CX3g027698 | LOC_Os03g56370 | Os03g0775000 | - | Detail |
| C1H3g07173 | 3:30,016,108-30,016,990 | - | C2H3g25248 | CX3g027698 | LOC_Os03g56370 | Os03g0775000 | - | Detail |
| C1H3g14191 | 3:30,019,407-30,023,914 | + | C2H3g05048 | CX3g026008 | LOC_Os03g56380 | Os03g0775200 | - | Detail |
| C1H3g27485 | 3:30,024,625-30,028,017 | + | C2H3g23811 | CX3g026938 | LOC_Os03g56390 | Os03g0775300 | - | Detail |
| C1H3g13212 | 3:30,028,349-30,030,760 | - | C2H3g12716 | CX3g030898 | LOC_Os03g56400 | Os03g0775400 | - | Detail |
| C1H3g05680 | 3:30,031,592-30,035,139 | + | C2H3g27854 | CX3g030889 | LOC_Os03g56410 | Os03g0775500 | - | Detail |
| C1H3g30894 | 3:30,038,646-30,041,365 | + | C2H3g25642 | CX3g030664 | LOC_Os03g56420 | Os03g0775600 | - | Detail |
| C1H3g19822 | 3:30,042,628-30,046,246 | + | C2H3g18914 | CX3g029071 | LOC_Os03g56430 | Os03g0775700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029772 | 3:472,972-474,839 | + | C1H3g22432 | C2H3g24553 | LOC_Os03g02020 | Os03g0110900 | - | Detail |
| CX3g026287 | 3:476,109-476,360 | - | - | - | - | Os03g0111000 | - | Detail |
| CX3g026446 | 3:477,347-481,959 | - | C1H3g02926 | C2H3g02060 | LOC_Os03g02030 | Os03g0111100 | - | Detail |
| CX3g031029 | 3:483,696-485,925 | - | C1H3g26294 | C2H3g10416 | LOC_Os03g02040 | Os03g0111200 | - | Detail |
| CX3g030230 | 3:489,039-489,335 | - | C1H3g15608 | C2H3g28715 | LOC_Os03g02050 | Os03g0111300 | - | Detail |
| CX3g026627 | 3:496,010-499,016 | - | C1H3g30842 | C2H3g08607 | LOC_Os03g02070 | Os03g0111400 | - | Detail |
| CX3g026803 | 3:506,595-507,240 | + | C1H3g12626 | C2H3g00134 | LOC_Os03g21740 | Os03g0111700 | - | Detail |
| CX3g029357 | 3:507,693-510,725 | + | C1H3g17498 | - | LOC_Os03g21600 | Os03g0333800 | - | Detail |
| CX3g029370 | 3:515,319-515,615 | - | - | - | - | Os10g0516250 | - | Detail |
| CX3g026774 | 3:521,747-523,112 | - | C1H3g02748 | - | - | - | - | Detail |
| CX3g028405 | 3:524,229-526,002 | - | C1H3g02748 | C2H3g30326 | - | - | - | Detail |
| CX3g030313 | 3:537,104-539,235 | + | C1H3g18662 | - | LOC_Os03g02080 | Os03g0111500 | - | Detail |
| CX3g030989 | 3:542,579-548,601 | - | C1H3g03993 | C2H3g23362 | LOC_Os03g02090 | Os03g0111600 | - | Detail |
| CX3g029050 | 3:549,717-555,646 | + | C1H3g29372 | C2H3g00134 | LOC_Os03g02100 | Os03g0694900 | - | Detail |
| CX3g028048 | 3:557,757-564,226 | + | C1H3g12244 | C2H3g12317 | LOC_Os03g02110 | Os03g0111800 | - | Detail |
| CX3g026996 | 3:567,625-576,486 | + | C1H3g07282 | C2H3g29148 | LOC_Os03g02150 | Os03g0112101 | - | Detail |
| CX3g029929 | 3:580,861-588,744 | + | C1H3g30522 | C2H3g00838 | LOC_Os03g02160 | Os03g0112700 | EHD4, OsC3H20, C3H20, Ehd4 | Detail |
| CX3g030050 | 3:590,160-594,055 | - | C1H3g07238 | C2H3g27881 | LOC_Os03g02170 | Os03g0112800 | STS1 | Detail |
| CX3g030634 | 3:594,768-596,405 | - | C1H3g09620 | C2H3g26177 | LOC_Os03g02180 | Os03g0112900 | OsF5HL2 | Detail |
| CX3g025594 | 3:600,580-600,822 | - | - | - | - | Os11g0474000 | - | Detail |