| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g14846 | 4:5,874,627-5,877,059 | - | C2H4g12193 | CX4g032586 | LOC_Os04g12560 | Os04g0202300 | SDRLK-LecRK2, OsLecRK2, Bph3 | Detail |
| C1H4g18742 | 4:5,893,442-5,895,408 | - | C2H4g18743 | CX4g032311 | LOC_Os04g12639 | Os04g0203400 | - | Detail |
| C1H4g19896 | 4:5,901,400-5,902,527 | + | C2H4g09802 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C1H4g29887 | 4:5,903,313-5,904,658 | + | C2H4g21161 | - | - | - | - | Detail |
| C1H4g20976 | 4:5,907,250-5,909,143 | - | C2H4g12841 | CX4g031765 | LOC_Os04g12950 | Os04g0203600 | - | Detail |
| C1H4g28286 | 4:5,911,019-5,913,015 | - | C2H4g21936 | CX4g031919 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| C1H4g16067 | 4:5,915,586-5,917,588 | - | C2H4g02969 | CX4g035782 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| C1H4g27745 | 4:5,921,715-5,924,694 | + | C2H4g16076 | CX4g035126 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| C1H4g31293 | 4:5,929,933-5,932,243 | - | C2H4g23571 | CX4g035248 | LOC_Os03g31026 | Os04g0206200 | - | Detail |
| C1H4g20788 | 4:5,935,021-5,936,148 | + | C2H4g09045 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C1H4g09867 | 4:5,936,582-5,938,412 | + | C2H4g10642 | - | - | - | - | Detail |
| C1H4g10329 | 4:5,950,911-5,951,514 | + | C2H4g07483 | - | - | Os04g0203450 | - | Detail |
| C1H4g06112 | 4:5,952,931-5,955,048 | - | C2H4g06798 | CX4g033024 | LOC_Os04g12960 | Os04g0206500 | - | Detail |
| C1H4g00866 | 4:5,957,490-5,957,897 | - | C2H4g21810 | CX4g031758 | LOC_Os04g12720 | Os04g0206600 | Os79 | Detail |
| C1H4g18509 | 4:5,958,088-5,959,491 | - | C2H4g21810 | CX4g036312 | LOC_Os04g12970 | Os04g0206600 | Os79 | Detail |
| C1H4g07274 | 4:5,963,500-5,966,277 | + | C2H4g29510 | CX4g035126 | LOC_Os04g12980 | Os04g0206700 | - | Detail |
| C1H4g18027 | 4:5,966,918-5,968,927 | - | C2H4g16445 | CX4g035007 | LOC_Os04g12990 | - | - | Detail |
| C1H4g10301 | 4:5,974,118-5,975,205 | - | C2H4g16703 | CX4g036323 | LOC_Os01g44200 | Os04g0206200 | - | Detail |
| C1H4g17664 | 4:5,977,971-5,979,098 | + | C2H4g09045 | CX4g032887 | LOC_Os04g13090 | Os04g0206300 | - | Detail |
| C1H4g15310 | 4:5,993,827-5,995,580 | - | C2H4g02969 | CX4g031765 | LOC_Os04g12950 | Os04g0206600 | Os79 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028464 | 3:354,060-358,154 | + | C1H3g19790 | C2H3g05829 | LOC_Os03g01790 | Os03g0108200 | - | Detail |
| CX3g028491 | 3:358,727-359,743 | - | C1H3g27345 | C2H3g04954 | LOC_Os03g01800 | Os03g0108300 | OsXTH19 | Detail |
| CX3g027775 | 3:364,694-366,227 | + | C1H3g11796 | C2H3g18698 | LOC_Os03g01810 | Os03g0108400 | - | Detail |
| CX3g028420 | 3:367,021-368,271 | - | C1H3g14852 | C2H3g18527 | LOC_Os03g01820 | Os03g0108500 | - | Detail |
| CX3g029215 | 3:369,924-372,959 | + | C1H3g13700 | C2H3g29405 | LOC_Os03g01830 | Os03g0108600 | TCD33, OsBIRH1 | Detail |
| CX3g030090 | 3:373,339-373,939 | - | C1H3g17215 | C2H3g30230 | LOC_Os03g01840 | Os03g0108700 | PACP | Detail |
| CX3g025648 | 3:375,723-378,926 | + | C1H3g26328 | C2H3g27460 | LOC_Os03g01850 | Os03g0118400 | - | Detail |
| CX3g026182 | 3:384,798-385,875 | + | C1H3g04942 | C2H3g19354 | LOC_Os03g01870 | Os03g0109000 | OsNAC055 | Detail |
| CX3g028027 | 3:399,291-403,594 | + | C1H3g16159 | C2H3g19398 | LOC_Os03g01880 | Os03g0109300 | - | Detail |
| CX3g025381 | 3:412,407-419,330 | + | C1H3g14888 | C2H3g02704 | LOC_Os03g01890 | Os03g0109400 | - | Detail |
| CX3g027697 | 3:420,820-421,254 | - | C1H3g13853 | C2H3g26914 | LOC_Os03g01900 | Os03g0109500 | - | Detail |
| CX3g030813 | 3:422,038-423,472 | - | C1H3g06734 | C2H3g07050 | LOC_Os03g01910 | Os03g0109600 | - | Detail |
| CX3g025309 | 3:424,740-425,560 | - | C1H3g07913 | C2H3g19994 | LOC_Os03g01915 | Os03g0109650 | - | Detail |
| CX3g026027 | 3:428,596-431,346 | - | C1H3g09381 | C2H3g11912 | LOC_Os03g01920 | Os03g0109700 | - | Detail |
| CX3g029421 | 3:432,024-434,425 | + | C1H3g13187 | C2H3g22613 | LOC_Os03g01930 | Os03g0109800 | - | Detail |
| CX3g026177 | 3:438,960-439,478 | + | C1H3g21853 | C2H3g20578 | LOC_Os03g01960 | Os03g0110300 | - | Detail |
| CX3g028468 | 3:442,123-448,955 | + | C1H3g18613 | C2H3g30307 | LOC_Os03g01970 | Os03g0110400 | - | Detail |
| CX3g031312 | 3:451,410-454,477 | + | C1H3g14106 | C2H3g29785 | LOC_Os03g01980 | Os03g0110500 | - | Detail |
| CX3g029449 | 3:459,546-462,425 | + | C1H3g30535 | C2H3g08775 | LOC_Os03g01990 | Os03g0699600 | - | Detail |
| CX3g031295 | 3:468,737-472,328 | + | C1H3g04599 | C2H3g26504 | LOC_Os03g02010 | Os03g0110800 | DRM2, OsDRM2, osdrm2 | Detail |