| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g01892 | 10:10,437,095-10,437,779 | - | C1H10g22659 | - | - | - | - | Detail |
| C2H10g28252 | 10:10,455,310-10,459,721 | + | C1H10g20546 | CX10g008168 | LOC_Os10g21460 | Os10g0358600 | - | Detail |
| C2H10g12273 | 10:10,461,766-10,464,428 | - | C1H10g14022 | CX10g010475 | LOC_Os10g21470 | Os10g0358700 | - | Detail |
| C2H10g29078 | 10:10,474,124-10,476,644 | - | C1H10g29945 | CX10g009930 | LOC_Os10g21490 | - | - | Detail |
| C2H10g02652 | 10:10,488,771-10,489,913 | + | C1H10g16528 | CX10g008439 | LOC_Os10g21540 | Os10g0359200 | - | Detail |
| C2H10g18902 | 10:10,498,404-10,501,797 | - | C1H10g18664 | CX10g009618 | LOC_Os10g21560 | Os10g0359500 | - | Detail |
| C2H10g05637 | 10:10,514,587-10,516,735 | - | C1H10g18874 | CX10g010522 | LOC_Os10g21590 | Os10g0360100 | - | Detail |
| C2H10g27251 | 10:10,521,535-10,522,304 | - | C1H10g17548 | - | - | - | - | Detail |
| C2H10g25817 | 10:10,529,597-10,529,976 | - | C1H10g10032 | - | - | - | - | Detail |
| C2H10g24961 | 10:10,536,850-10,540,537 | + | C1H10g30481 | CX10g007795 | LOC_Os10g21800 | Os10g0360800 | - | Detail |
| C2H10g25330 | 10:10,542,442-10,547,040 | + | - | - | - | - | - | Detail |
| C2H10g16627 | 10:10,543,097-10,546,184 | - | C1H10g19484 | CX10g010771 | LOC_Os10g21660 | - | - | Detail |
| C2H10g16136 | 10:10,557,714-10,558,349 | - | C1H5g20408 | - | - | - | - | Detail |
| C2H10g16733 | 10:10,563,595-10,563,995 | + | - | - | - | - | - | Detail |
| C2H10g30610 | 10:10,564,877-10,565,523 | + | - | - | - | - | - | Detail |
| C2H10g05328 | 10:10,572,798-10,573,292 | + | C1H10g15818 | CX10g007732 | LOC_Os10g21670 | Os10g0361000 | - | Detail |
| C2H10g20812 | 10:10,588,844-10,589,320 | + | C1H10g09092 | CX10g009951 | LOC_Os10g21670 | Os10g0361300 | - | Detail |
| C2H10g05563 | 10:10,600,692-10,601,414 | - | C1H10g28163 | CX10g007540 | - | - | - | Detail |
| C2H10g24548 | 10:10,604,322-10,604,825 | + | C1H10g27379 | CX10g008677 | LOC_Os10g21790 | Os10g0361900 | - | Detail |
| C2H10g01089 | 10:10,609,788-10,621,213 | - | C1H10g20202 | CX10g010859 | LOC_Os10g21810 | Os10g0362300 | HK5, OHK3b, OHK3, HK, OsHK5, Crl3, Ohk3, OsHK2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022094 | 2:32,864,626-32,865,787 | + | C1H2g03772 | C2H2g10544 | LOC_Os02g58720 | Os02g0833900 | - | Detail |
| CX2g020759 | 2:32,870,025-32,874,136 | + | C1H2g11657 | C2H2g16606 | LOC_Os02g58730 | Os02g0834000 | - | Detail |
| CX2g019635 | 2:32,875,765-32,875,914 | - | - | - | - | - | - | Detail |
| CX2g019767 | 2:32,877,773-32,878,605 | - | C1H2g28385 | C2H2g00908 | LOC_Os02g58740 | Os02g0834300 | - | Detail |
| CX2g023144 | 2:32,883,012-32,889,682 | + | C1H2g12235 | C2H2g09948 | LOC_Os02g58790 | Os02g0834700 | - | Detail |
| CX2g019589 | 2:32,891,371-32,891,796 | - | C1H2g23557 | - | - | Os01g0978500 | - | Detail |
| CX3g025409 | 3:12,340-14,290 | + | C1H3g12473 | C2H3g08981 | LOC_Os03g01008 | Os03g0100010 | - | Detail |
| CX3g025646 | 3:16,243-17,067 | - | C1H3g31569 | C2H3g23710 | LOC_Os03g01012 | Os03g0100020 | OsTET4 | Detail |
| CX3g029008 | 3:21,999-24,675 | + | C1H3g23303 | C2H3g06479 | LOC_Os03g01014 | Os03g0100030 | OsG | Detail |
| CX3g028519 | 3:26,338-27,480 | + | C1H3g16601 | C2H3g18625 | LOC_Os03g01018 | Os03g0100040 | - | Detail |
| CX3g030591 | 3:27,850-30,702 | - | C1H3g04046 | C2H3g06216 | LOC_Os03g01016 | Os03g0100050 | - | Detail |
| CX3g030970 | 3:33,492-34,091 | + | C1H3g07060 | C2H3g04061 | LOC_Os03g01020 | Os03g0100100 | OsPMEI12 | Detail |
| CX3g030306 | 3:34,327-34,938 | - | C1H3g18524 | C2H3g15971 | - | Os03g0100200 | - | Detail |
| CX3g029184 | 3:35,829-35,999 | - | - | - | - | - | - | Detail |
| CX3g026042 | 3:36,819-37,034 | - | - | - | - | - | - | Detail |
| CX3g030081 | 3:38,496-40,863 | + | C1H3g15772 | C2H3g14193 | LOC_Os03g01090 | Os03g0100300 | - | Detail |
| CX3g031055 | 3:41,492-46,640 | + | C1H3g08646 | C2H3g15742 | LOC_Os03g01100 | Os03g0100400 | - | Detail |
| CX3g028450 | 3:47,093-65,263 | + | C1H3g24675 | C2H3g23110 | LOC_Os03g01110 | Os03g0100500 | - | Detail |
| CX3g025060 | 3:67,036-67,611 | - | - | - | - | - | - | Detail |
| CX3g030861 | 3:69,850-79,607 | + | C1H3g24264 | C2H3g21128 | LOC_Os03g01120 | Os03g0100800 | Os-HA1, OsA8 | Detail |