| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g07379 | 7:1,284,437-1,284,955 | + | C2H7g30099 | CX7g046883 | LOC_Os07g03690 | Os07g0128800 | - | Detail |
| C1H7g03279 | 7:1,291,717-1,292,223 | + | C2H7g02005 | CX7g046883 | LOC_Os07g03710 | Os07g0129200 | PR1A, OsPR1a, OsPR-1a, PR1a, OsPR1#074, OsPR1-74, PR-1a, OsSCP, SCP | Detail |
| C1H7g25003 | 7:1,303,236-1,305,696 | - | C2H7g21640 | CX7g049764 | LOC_Os07g03760 | - | - | Detail |
| C1H7g21106 | 7:1,333,451-1,339,476 | + | C2H7g07364 | CX7g047059 | LOC_Os07g03770 | Os07g0129700 | OSH15, Oskn3 | Detail |
| C1H7g23406 | 7:1,344,162-1,344,768 | - | C2H7g12349 | - | LOC_Os07g03780 | Os07g0129800 | - | Detail |
| C1H7g13341 | 7:1,348,098-1,350,020 | - | C2H7g17374 | - | LOC_Os07g03790 | Os07g0129900 | - | Detail |
| C1H7g01046 | 7:1,354,016-1,357,784 | + | C2H7g09208 | - | - | Os07g0130000 | - | Detail |
| C1H7g10554 | 7:1,358,011-1,360,053 | - | C2H7g28273 | - | LOC_Os07g03810 | Os07g0130100 | - | Detail |
| C1H7g13345 | 7:1,362,971-1,365,064 | - | C2H7g22634 | - | LOC_Os07g03820 | Os07g0130200 | - | Detail |
| C1H7g20486 | 7:1,366,531-1,369,170 | - | C2H7g04790 | - | LOC_Os07g03830 | Os07g0131375 | - | Detail |
| C1H7g13914 | 7:1,370,512-1,372,590 | - | C2H7g13157 | - | LOC_Os07g03840 | Os07g0130400 | - | Detail |
| C1H7g22179 | 7:1,373,843-1,374,382 | - | - | - | - | - | - | Detail |
| C1H7g21616 | 7:1,375,748-1,377,748 | - | C2H7g09954 | - | LOC_Os07g03890 | Os07g0262800 | - | Detail |
| C1H7g05952 | 7:1,379,335-1,381,323 | - | C2H7g14045 | - | LOC_Os07g03860 | Os07g0131375 | - | Detail |
| C1H7g30530 | 7:1,382,905-1,384,935 | - | C2H7g25684 | - | LOC_Os07g03870 | Os07g0130800 | - | Detail |
| C1H7g17964 | 7:1,383,025-1,383,546 | + | C2H7g18582 | - | LOC_Os07g03849 | Os07g0130500 | - | Detail |
| C1H7g19523 | 7:1,389,128-1,391,047 | - | - | - | - | - | - | Detail |
| C1H7g31707 | 7:1,391,236-1,396,119 | - | C2H7g19397 | - | LOC_Os07g03880 | Os07g0262800 | - | Detail |
| C1H7g19595 | 7:1,391,252-1,392,807 | + | C2H7g18582 | - | LOC_Os07g03849 | Os07g0130500 | - | Detail |
| C1H7g21406 | 7:1,396,162-1,403,733 | - | C2H7g17372 | - | LOC_Os07g03890 | Os07g0131375 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g022094 | 2:32,864,626-32,865,787 | + | C1H2g03772 | C2H2g10544 | LOC_Os02g58720 | Os02g0833900 | - | Detail |
| CX2g020759 | 2:32,870,025-32,874,136 | + | C1H2g11657 | C2H2g16606 | LOC_Os02g58730 | Os02g0834000 | - | Detail |
| CX2g019635 | 2:32,875,765-32,875,914 | - | - | - | - | - | - | Detail |
| CX2g019767 | 2:32,877,773-32,878,605 | - | C1H2g28385 | C2H2g00908 | LOC_Os02g58740 | Os02g0834300 | - | Detail |
| CX2g023144 | 2:32,883,012-32,889,682 | + | C1H2g12235 | C2H2g09948 | LOC_Os02g58790 | Os02g0834700 | - | Detail |
| CX2g019589 | 2:32,891,371-32,891,796 | - | C1H2g23557 | - | - | Os01g0978500 | - | Detail |
| CX3g025409 | 3:12,340-14,290 | + | C1H3g12473 | C2H3g08981 | LOC_Os03g01008 | Os03g0100010 | - | Detail |
| CX3g025646 | 3:16,243-17,067 | - | C1H3g31569 | C2H3g23710 | LOC_Os03g01012 | Os03g0100020 | OsTET4 | Detail |
| CX3g029008 | 3:21,999-24,675 | + | C1H3g23303 | C2H3g06479 | LOC_Os03g01014 | Os03g0100030 | OsG | Detail |
| CX3g028519 | 3:26,338-27,480 | + | C1H3g16601 | C2H3g18625 | LOC_Os03g01018 | Os03g0100040 | - | Detail |
| CX3g030591 | 3:27,850-30,702 | - | C1H3g04046 | C2H3g06216 | LOC_Os03g01016 | Os03g0100050 | - | Detail |
| CX3g030970 | 3:33,492-34,091 | + | C1H3g07060 | C2H3g04061 | LOC_Os03g01020 | Os03g0100100 | OsPMEI12 | Detail |
| CX3g030306 | 3:34,327-34,938 | - | C1H3g18524 | C2H3g15971 | - | Os03g0100200 | - | Detail |
| CX3g029184 | 3:35,829-35,999 | - | - | - | - | - | - | Detail |
| CX3g026042 | 3:36,819-37,034 | - | - | - | - | - | - | Detail |
| CX3g030081 | 3:38,496-40,863 | + | C1H3g15772 | C2H3g14193 | LOC_Os03g01090 | Os03g0100300 | - | Detail |
| CX3g031055 | 3:41,492-46,640 | + | C1H3g08646 | C2H3g15742 | LOC_Os03g01100 | Os03g0100400 | - | Detail |
| CX3g028450 | 3:47,093-65,263 | + | C1H3g24675 | C2H3g23110 | LOC_Os03g01110 | Os03g0100500 | - | Detail |
| CX3g025060 | 3:67,036-67,611 | - | - | - | - | - | - | Detail |
| CX3g030861 | 3:69,850-79,607 | + | C1H3g24264 | C2H3g21128 | LOC_Os03g01120 | Os03g0100800 | Os-HA1, OsA8 | Detail |