| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22731 | 1:24,806,899-24,821,417 | - | C2H1g03816 | CX1g004904 | LOC_Os01g48680 | Os01g0678500 | TPC1, OsTPC1, Tpc1, OsCC1 | Detail |
| C1H1g06484 | 1:24,822,645-24,824,648 | + | C2H1g17432 | CX1g001832 | LOC_Os01g48690 | Os01g0678600 | - | Detail |
| C1H1g21202 | 1:24,825,534-24,828,516 | - | C2H1g29587 | CX1g005378 | LOC_Os01g48700 | Os01g0678700 | - | Detail |
| C1H1g29809 | 1:24,831,421-24,834,882 | + | C2H1g22453 | CX1g000800 | - | - | - | Detail |
| C1H1g09148 | 1:24,836,776-24,837,408 | - | C2H1g18621 | CX1g006182 | LOC_Os01g48710 | Os01g0678800 | - | Detail |
| C1H1g01369 | 1:24,845,874-24,854,466 | + | C2H1g02873 | CX1g006519 | LOC_Os01g48720 | Os01g0679000 | - | Detail |
| C1H1g15834 | 1:24,862,555-24,939,365 | - | C2H1g22016 | CX1g002522 | LOC_Os01g48830 | Os01g0680700 | - | Detail |
| C1H1g09308 | 1:24,863,371-24,867,936 | + | C2H1g10975 | CX1g004313 | LOC_Os01g48750 | Os01g0679550 | - | Detail |
| C1H1g00895 | 1:24,869,571-24,872,932 | + | C2H1g25010 | CX1g003619 | LOC_Os01g48760 | Os01g0679600 | - | Detail |
| C1H1g15404 | 1:24,886,940-24,893,719 | + | C2H1g01242 | CX1g003718 | LOC_Os01g48790 | Os01g0679900 | - | Detail |
| C1H1g14743 | 1:24,904,493-24,905,653 | + | C2H1g18628 | CX1g004327 | LOC_Os01g48800 | Os01g0680200 | OsPUP4, BG3/OsPUP4, BG3 | Detail |
| C1H1g08166 | 1:24,917,950-24,920,122 | + | C2H1g09841 | CX1g006918 | LOC_Os01g48810 | Os01g0680400 | - | Detail |
| C1H1g07424 | 1:24,925,640-24,926,551 | + | C2H1g14175 | CX1g002655 | LOC_Os01g48820 | Os01g0680600 | - | Detail |
| C1H1g07492 | 1:24,931,644-24,932,133 | + | - | - | - | Os01g0680650 | - | Detail |
| C1H1g17992 | 1:24,948,315-24,950,911 | - | C2H1g29263 | CX1g007143 | LOC_Os01g48850 | Os01g0680900 | - | Detail |
| C1H1g20689 | 1:24,952,547-24,958,250 | - | C2H1g05013 | CX1g002388 | LOC_Os01g48874 | Os01g0681000 | - | Detail |
| C1H1g14533 | 1:24,963,599-24,966,274 | + | C2H1g17133 | CX1g001461 | LOC_Os01g48900 | Os01g0681100 | - | Detail |
| C1H1g07251 | 1:24,966,702-24,969,016 | + | C2H1g07127 | CX1g001461 | LOC_Os01g48900 | Os05g0556100 | - | Detail |
| C1H1g21340 | 1:24,970,459-24,975,608 | - | C2H1g13127 | CX1g007055 | LOC_Os01g48910 | Os01g0681200 | - | Detail |
| C1H1g18369 | 1:24,978,777-24,984,105 | - | C2H1g29187 | CX1g000478 | LOC_Os01g48920 | Os01g0681400 | ATG6A, OsATG6a | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g020094 | 2:32,757,302-32,758,435 | + | C1H2g07202 | C2H2g23374 | LOC_Os02g58510 | Os02g0831800 | - | Detail |
| CX2g023764 | 2:32,760,268-32,761,926 | + | C1H2g30272 | C2H2g07627 | LOC_Os02g58520 | Os02g0832000 | OsCPK6 | Detail |
| CX2g022525 | 2:32,764,468-32,766,411 | + | C1H2g14686 | C2H2g09295 | LOC_Os02g58530 | Os02g0832100 | OsAZT2 | Detail |
| CX2g020098 | 2:32,770,423-32,770,914 | - | C1H2g09758 | C2H2g17582 | LOC_Os02g58540 | Os02g0832150 | - | Detail |
| CX2g021300 | 2:32,777,954-32,778,403 | - | - | - | - | Os02g0832301 | - | Detail |
| CX2g019379 | 2:32,777,984-32,791,712 | + | C1H2g02036 | C2H2g06954 | LOC_Os02g58560 | Os02g0832400 | - | Detail |
| CX2g023914 | 2:32,792,685-32,793,680 | + | C1H2g15805 | C2H2g11634 | LOC_Os02g58570 | Os02g0832600 | - | Detail |
| CX2g023019 | 2:32,794,501-32,799,616 | + | C1H2g09405 | C2H2g21531 | LOC_Os02g58580 | Os02g0832700 | - | Detail |
| CX2g020678 | 2:32,800,206-32,805,531 | - | C1H2g16297 | C2H2g26958 | LOC_Os02g58590 | Os02g0832800 | - | Detail |
| CX2g019916 | 2:32,806,841-32,809,735 | + | C1H2g01791 | C2H2g09861 | LOC_Os02g58610 | Os02g0833000 | - | Detail |
| CX2g021372 | 2:32,822,179-32,822,397 | - | - | - | - | - | - | Detail |
| CX2g019227 | 2:32,822,810-32,829,311 | + | C1H2g02208 | C2H2g10495 | LOC_Os02g58620 | Os02g0833050 | - | Detail |
| CX2g023889 | 2:32,834,715-32,835,086 | - | - | - | - | - | - | Detail |
| CX2g021645 | 2:32,836,688-32,837,893 | - | C1H2g06241 | C2H2g23207 | LOC_Os02g58640 | Os02g0833300 | - | Detail |
| CX2g021439 | 2:32,840,799-32,845,278 | - | C1H2g05838 | C2H2g02599 | LOC_Os02g58650 | Os02g0833400 | - | Detail |
| CX2g020743 | 2:32,846,761-32,847,432 | + | C1H2g08130 | C2H2g02163 | - | - | - | Detail |
| CX2g020873 | 2:32,848,028-32,850,660 | + | C1H2g23825 | C2H2g23373 | LOC_Os02g58660 | Os02g0833500 | - | Detail |
| CX2g022697 | 2:32,854,965-32,855,279 | + | - | - | - | - | - | Detail |
| CX2g021276 | 2:32,856,539-32,856,937 | + | - | C2H2g22829 | LOC_Os02g37309 | Os02g0265300 | - | Detail |
| CX2g021157 | 2:32,857,634-32,858,421 | - | C1H2g00990 | C2H2g03257 | LOC_Os02g58670 | Os02g0833600 | - | Detail |