| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g30640 | 4:1,719,255-1,723,962 | + | C1H4g17799 | CX4g036248 | LOC_Os04g04330 | Os04g0132500 | CTB4a, OsRLCK127, RLCK127 | Detail |
| C2H4g19144 | 4:1,739,532-1,740,113 | - | C1H4g19447 | CX4g034832 | - | - | - | Detail |
| C2H4g05610 | 4:1,764,995-1,767,457 | + | C1H4g23533 | CX4g032097 | LOC_Os04g04750 | Os04g0134800 | - | Detail |
| C2H4g00703 | 4:1,777,022-1,779,592 | - | C1H4g07028 | CX4g035198 | LOC_Os04g04670 | Os04g0125700 | - | Detail |
| C2H4g09916 | 4:1,791,202-1,791,932 | - | C1H4g07028 | CX4g032348 | LOC_Os04g04770 | Os04g0125700 | - | Detail |
| C2H4g15842 | 4:1,841,229-1,843,356 | + | C1H4g07028 | CX4g032198 | LOC_Os04g04670 | Os04g0125700 | - | Detail |
| C2H4g06784 | 4:1,926,268-1,927,874 | + | C1H4g07028 | CX4g034389 | LOC_Os04g04670 | Os04g0136000 | - | Detail |
| C2H4g27188 | 4:1,989,202-1,989,675 | - | - | CX4g032153 | - | - | - | Detail |
| C2H4g18525 | 4:2,014,982-2,015,732 | - | - | CX4g034918 | - | - | - | Detail |
| C2H4g26240 | 4:2,023,261-2,024,654 | - | C1H4g07028 | CX4g032163 | LOC_Os04g05470 | Os04g0125700 | - | Detail |
| C2H4g08696 | 4:2,025,532-2,026,003 | - | C1H4g07028 | CX4g032163 | LOC_Os04g05470 | Os04g0140666 | - | Detail |
| C2H4g14822 | 4:2,053,699-2,054,665 | - | C1H4g07028 | CX4g032348 | LOC_Os04g04770 | Os04g0125700 | - | Detail |
| C2H4g13248 | 4:2,075,582-2,078,396 | - | C1H4g07691 | CX4g036479 | LOC_Os04g05010 | Os04g0136700 | - | Detail |
| C2H4g08946 | 4:2,087,740-2,089,679 | + | C1H4g00435 | CX4g033792 | LOC_Os04g05030 | Os04g0136900 | - | Detail |
| C2H4g24029 | 4:2,119,317-2,124,783 | + | C1H4g17319 | CX4g036173 | LOC_Os04g05050 | Os04g0137201 | OsPLL4.2 | Detail |
| C2H4g03790 | 4:2,139,695-2,140,441 | - | C1H4g22056 | CX4g032910 | LOC_Os04g05070 | Os04g0137450 | - | Detail |
| C2H4g29226 | 4:2,148,952-2,152,002 | + | C1H4g09732 | CX4g033283 | LOC_Os04g05080 | Os04g0137500 | - | Detail |
| C2H4g11106 | 4:2,167,536-2,167,985 | - | - | - | - | - | - | Detail |
| C2H4g03441 | 4:2,178,143-2,186,459 | - | C1H4g13170 | CX4g035554 | LOC_Os04g05470 | Os04g0140400 | - | Detail |
| C2H4g16775 | 4:2,186,503-2,187,141 | - | C1H4g07028 | CX4g035554 | LOC_Os04g05470 | Os04g0140666 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005617 | 1:12,772,851-12,773,469 | - | C1H1g28858 | - | LOC_Os04g17200 | - | - | Detail |
| CX1g002860 | 1:12,779,736-12,787,514 | + | C1H1g00555 | C2H1g21333 | LOC_Os01g24880 | Os01g0350900 | IPI1 | Detail |
| CX1g005272 | 1:12,795,558-12,801,753 | + | C1H1g05982 | C2H1g14607 | LOC_Os01g24940 | Os01g0351100 | - | Detail |
| CX1g000433 | 1:12,810,610-12,817,640 | + | C1H1g06101 | C2H1g09806 | LOC_Os01g24940 | Os01g0351200 | - | Detail |
| CX1g000462 | 1:12,820,393-12,822,891 | + | - | - | LOC_Os01g24950 | Os01g0351300 | - | Detail |
| CX1g006080 | 1:12,825,806-12,828,117 | - | C1H1g24498 | C2H1g18699 | LOC_Os01g24960 | Os01g0351500 | - | Detail |
| CX1g002020 | 1:12,835,670-12,836,994 | + | C1H1g12342 | C2H1g23303 | LOC_Os01g24980 | Os01g0351800 | - | Detail |
| CX1g002475 | 1:12,842,447-12,845,658 | + | C1H1g19518 | C2H1g18138 | LOC_Os01g25010 | Os01g0352100 | - | Detail |
| CX1g000138 | 1:12,854,321-12,854,515 | - | - | - | - | Os01g0612350 | - | Detail |
| CX1g007147 | 1:12,855,751-12,856,405 | - | C1H1g24498 | C2H1g18699 | LOC_Os01g25030 | Os01g0351500 | - | Detail |
| CX1g006850 | 1:12,862,668-12,865,297 | + | C1H1g19827 | C2H1g05879 | - | Os01g0624700 | OsWRKY03, OsWRKY12 | Detail |
| CX1g003259 | 1:12,891,885-12,892,821 | + | C1H1g16000 | C2H1g07698 | LOC_Os01g25100 | Os01g0353400 | OsGST4 | Detail |
| CX1g006421 | 1:12,895,296-12,895,766 | + | - | C2H9g15136 | - | - | - | Detail |
| CX1g006645 | 1:12,896,807-12,899,645 | + | C1H1g26956 | C2H1g26082 | LOC_Os01g25110 | Os01g0353600 | - | Detail |
| CX1g003802 | 1:12,905,711-12,905,968 | - | C1H1g21653 | C2H1g28232 | LOC_Os01g25160 | - | - | Detail |
| CX1g003965 | 1:12,930,973-12,931,605 | - | - | - | - | - | - | Detail |
| CX1g000417 | 1:12,947,410-12,947,979 | - | C1H1g21653 | C2H1g28232 | LOC_Os01g25160 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| CX1g005641 | 1:12,953,283-12,954,307 | - | C1H1g17593 | C2H1g28563 | LOC_Os03g29584 | Os03g0409600 | - | Detail |
| CX1g006951 | 1:12,956,252-12,960,668 | - | C1H1g31563 | C2H1g15011 | LOC_Os01g25189 | Os01g0354200 | - | Detail |
| CX1g002132 | 1:12,974,079-12,977,333 | + | C1H1g07040 | C2H1g21879 | LOC_Os01g25240 | Os01g0354700 | - | Detail |