| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g06187 | 7:22,776,694-22,778,089 | + | C1H7g23590 | CX7g047151 | LOC_Os07g46320 | Os07g0656600 | - | Detail |
| C2H7g06619 | 7:22,779,208-22,781,228 | + | C1H7g07350 | CX7g050396 | LOC_Os07g46330 | Os07g0656700 | - | Detail |
| C2H7g02836 | 7:22,783,770-22,786,614 | + | C1H7g07717 | CX7g048774 | LOC_Os07g46340 | Os07g0656800 | - | Detail |
| C2H7g14878 | 7:22,787,118-22,793,090 | - | C1H7g07607 | CX7g047383 | LOC_Os07g46350 | Os07g0656900 | - | Detail |
| C2H7g04738 | 7:22,802,631-22,803,486 | - | C1H7g27665 | CX7g048479 | LOC_Os07g46360 | Os07g0657100 | GLYI10, OsGLYI10, OsEnS-113, OsGly I | Detail |
| C2H7g08638 | 7:22,805,369-22,815,777 | + | C1H7g27319 | CX7g049032 | LOC_Os07g46370 | Os07g0657200 | - | Detail |
| C2H7g18935 | 7:22,836,866-22,838,416 | + | C1H7g28583 | CX7g049142 | LOC_Os07g46390 | Os07g0657500 | - | Detail |
| C2H7g14161 | 7:22,839,013-22,841,242 | - | C1H7g26054 | CX7g047377 | LOC_Os07g46400 | Os07g0657600 | - | Detail |
| C2H7g20799 | 7:22,843,556-22,847,639 | + | C1H7g18592 | CX7g048318 | LOC_Os07g46410 | Os07g0657900 | NTRC, OsNTRC, NtrC, OsGRL15 | Detail |
| C2H7g02338 | 7:22,848,784-22,849,710 | + | C1H7g03211 | CX7g050319 | LOC_Os07g46420 | Os07g0658000 | - | Detail |
| C2H7g29224 | 7:22,850,529-22,852,645 | - | C1H7g29073 | CX7g050176 | LOC_Os07g46430 | Os07g0658100 | - | Detail |
| C2H7g23627 | 7:22,853,397-22,853,735 | - | C1H7g29073 | CX7g050176 | LOC_Os07g46430 | Os07g0658100 | - | Detail |
| C2H7g06774 | 7:22,855,057-22,858,531 | - | C1H7g02626 | CX7g047277 | LOC_Os07g46440 | Os07g0658200 | - | Detail |
| C2H7g12439 | 7:22,861,624-22,871,254 | + | C1H7g11549 | CX7g046507 | LOC_Os07g46450 | Os07g0658300 | Spin6.2, SPIN6.2 | Detail |
| C2H7g11265 | 7:22,871,558-22,886,693 | - | C1H7g12828 | CX7g049483 | LOC_Os07g46460 | Os07g0658400 | OsGLU, OsFd-GOGAT, Fd-GOGAT | Detail |
| C2H7g28890 | 7:22,898,759-22,899,349 | - | C1H7g29104 | CX7g048188 | LOC_Os04g24130 | Os07g0419300 | - | Detail |
| C2H7g28550 | 7:22,899,544-22,900,596 | - | - | - | - | - | - | Detail |
| C2H7g18544 | 7:22,904,854-22,909,392 | - | C1H7g00341 | CX7g046195 | LOC_Os07g46490 | Os07g0658700 | - | Detail |
| C2H7g21264 | 7:22,926,210-22,927,717 | - | C1H7g11459 | CX7g047084 | LOC_Os07g46500 | Os07g0659100 | - | Detail |
| C2H7g14144 | 7:22,931,108-22,931,824 | + | C1H7g27249 | CX7g048197 | LOC_Os07g46510 | Os07g0659300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005617 | 1:12,772,851-12,773,469 | - | C1H1g28858 | - | LOC_Os04g17200 | - | - | Detail |
| CX1g002860 | 1:12,779,736-12,787,514 | + | C1H1g00555 | C2H1g21333 | LOC_Os01g24880 | Os01g0350900 | IPI1 | Detail |
| CX1g005272 | 1:12,795,558-12,801,753 | + | C1H1g05982 | C2H1g14607 | LOC_Os01g24940 | Os01g0351100 | - | Detail |
| CX1g000433 | 1:12,810,610-12,817,640 | + | C1H1g06101 | C2H1g09806 | LOC_Os01g24940 | Os01g0351200 | - | Detail |
| CX1g000462 | 1:12,820,393-12,822,891 | + | - | - | LOC_Os01g24950 | Os01g0351300 | - | Detail |
| CX1g006080 | 1:12,825,806-12,828,117 | - | C1H1g24498 | C2H1g18699 | LOC_Os01g24960 | Os01g0351500 | - | Detail |
| CX1g002020 | 1:12,835,670-12,836,994 | + | C1H1g12342 | C2H1g23303 | LOC_Os01g24980 | Os01g0351800 | - | Detail |
| CX1g002475 | 1:12,842,447-12,845,658 | + | C1H1g19518 | C2H1g18138 | LOC_Os01g25010 | Os01g0352100 | - | Detail |
| CX1g000138 | 1:12,854,321-12,854,515 | - | - | - | - | Os01g0612350 | - | Detail |
| CX1g007147 | 1:12,855,751-12,856,405 | - | C1H1g24498 | C2H1g18699 | LOC_Os01g25030 | Os01g0351500 | - | Detail |
| CX1g006850 | 1:12,862,668-12,865,297 | + | C1H1g19827 | C2H1g05879 | - | Os01g0624700 | OsWRKY03, OsWRKY12 | Detail |
| CX1g003259 | 1:12,891,885-12,892,821 | + | C1H1g16000 | C2H1g07698 | LOC_Os01g25100 | Os01g0353400 | OsGST4 | Detail |
| CX1g006421 | 1:12,895,296-12,895,766 | + | - | C2H9g15136 | - | - | - | Detail |
| CX1g006645 | 1:12,896,807-12,899,645 | + | C1H1g26956 | C2H1g26082 | LOC_Os01g25110 | Os01g0353600 | - | Detail |
| CX1g003802 | 1:12,905,711-12,905,968 | - | C1H1g21653 | C2H1g28232 | LOC_Os01g25160 | - | - | Detail |
| CX1g003965 | 1:12,930,973-12,931,605 | - | - | - | - | - | - | Detail |
| CX1g000417 | 1:12,947,410-12,947,979 | - | C1H1g21653 | C2H1g28232 | LOC_Os01g25160 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| CX1g005641 | 1:12,953,283-12,954,307 | - | C1H1g17593 | C2H1g28563 | LOC_Os03g29584 | Os03g0409600 | - | Detail |
| CX1g006951 | 1:12,956,252-12,960,668 | - | C1H1g31563 | C2H1g15011 | LOC_Os01g25189 | Os01g0354200 | - | Detail |
| CX1g002132 | 1:12,974,079-12,977,333 | + | C1H1g07040 | C2H1g21879 | LOC_Os01g25240 | Os01g0354700 | - | Detail |