| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g25248 | 3:29,365,346-29,367,619 | - | C1H3g10204 | CX3g027698 | LOC_Os03g56370 | Os03g0775000 | - | Detail |
| C2H3g05048 | 3:29,371,454-29,375,985 | + | C1H3g14191 | CX3g026008 | LOC_Os03g56380 | Os03g0775200 | - | Detail |
| C2H3g23503 | 3:29,374,453-29,374,884 | - | - | - | - | Os03g0775250 | - | Detail |
| C2H3g23811 | 3:29,376,600-29,380,081 | + | C1H3g27485 | CX3g026938 | LOC_Os03g56390 | Os03g0775300 | - | Detail |
| C2H3g12716 | 3:29,380,413-29,382,824 | - | C1H3g13212 | CX3g030898 | LOC_Os03g56400 | Os03g0775400 | - | Detail |
| C2H3g27854 | 3:29,383,365-29,386,902 | + | C1H3g05680 | CX3g030889 | LOC_Os03g56410 | Os03g0775500 | - | Detail |
| C2H3g25642 | 3:29,395,401-29,398,122 | + | C1H3g30894 | CX3g030664 | LOC_Os03g56420 | Os03g0775600 | - | Detail |
| C2H3g18914 | 3:29,399,385-29,403,005 | + | C1H3g19822 | CX3g029071 | LOC_Os03g56430 | Os03g0775700 | - | Detail |
| C2H3g00007 | 3:29,412,826-29,414,241 | + | C1H3g04719 | CX3g026587 | LOC_Os03g56450 | Os03g0775900 | - | Detail |
| C2H3g28249 | 3:29,418,074-29,425,033 | + | C1H3g16991 | CX3g026064 | LOC_Os03g56460 | Os03g0776000 | - | Detail |
| C2H3g15730 | 3:29,425,373-29,427,891 | - | C1H3g04454 | CX3g028659 | LOC_Os03g56470 | Os03g0776100 | OsPERK4 | Detail |
| C2H3g19254 | 3:29,447,198-29,449,236 | + | C1H3g02970 | CX3g025698 | LOC_Os03g56540 | Os03g0776900 | - | Detail |
| C2H3g09900 | 3:29,461,207-29,462,985 | + | C1H3g04407 | CX3g029754 | LOC_Os03g56580 | Os03g0777000 | ONAC066 | Detail |
| C2H3g20066 | 3:29,464,687-29,467,678 | - | C1H3g14095 | CX3g026134 | LOC_Os03g56590 | Os03g0777100 | - | Detail |
| C2H3g09685 | 3:29,469,144-29,470,883 | - | C1H3g29609 | CX3g028274 | LOC_Os03g56610 | Os03g0777500 | - | Detail |
| C2H3g13878 | 3:29,476,702-29,479,338 | + | C1H3g10794 | CX3g026442 | LOC_Os03g56620 | Os03g0777600 | - | Detail |
| C2H3g10928 | 3:29,479,505-29,485,846 | - | C1H3g30679 | CX3g029819 | LOC_Os03g56630 | Os03g0777700 | - | Detail |
| C2H3g07763 | 3:29,491,830-29,499,002 | + | C1H3g05671 | CX3g031249 | LOC_Os03g56660 | Os03g0778000 | - | Detail |
| C2H3g24740 | 3:29,576,904-29,577,827 | - | C1H3g21633 | CX3g030337 | LOC_Os03g56730 | Os03g0779000 | - | Detail |
| C2H3g01525 | 3:29,588,873-29,589,732 | - | - | CX3g027209 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021877 | 2:32,658,579-32,662,081 | + | C1H2g22040 | C2H2g08873 | LOC_Os02g58250 | Os02g0829400 | - | Detail |
| CX2g020227 | 2:32,662,742-32,665,825 | - | C1H2g19670 | C2H2g06590 | LOC_Os02g58260 | Os02g0829500 | - | Detail |
| CX2g023481 | 2:32,666,268-32,669,896 | - | C1H2g11754 | C2H2g01627 | LOC_Os02g58280 | Os02g0829600 | - | Detail |
| CX2g021237 | 2:32,673,516-32,674,790 | - | C1H2g30265 | C2H2g10073 | LOC_Os02g58300 | Os02g0829800 | - | Detail |
| CX2g019654 | 2:32,675,393-32,678,416 | - | C1H2g28907 | C2H2g27848 | LOC_Os02g58310 | Os02g0829900 | - | Detail |
| CX2g021002 | 2:32,680,574-32,685,372 | - | C1H2g15905 | C2H2g28933 | LOC_Os02g58340 | Os02g0830100 | - | Detail |
| CX2g021148 | 2:32,686,391-32,687,178 | - | C1H2g26748 | C2H2g24710 | LOC_Os02g58350 | Os02g0830200 | RR3, OSRR3, OsRR3, rr3, Rra7, OsRRA7 | Detail |
| CX2g019480 | 2:32,690,445-32,696,207 | - | C1H2g04850 | C2H2g15978 | LOC_Os02g58360 | Os02g0830300 | - | Detail |
| CX2g021651 | 2:32,698,367-32,698,825 | - | - | - | LOC_Os02g58370 | - | - | Detail |
| CX2g019366 | 2:32,702,776-32,707,097 | - | C1H2g28740 | C2H2g05318 | LOC_Os02g58390 | Os02g0830700 | - | Detail |
| CX2g022335 | 2:32,709,568-32,709,747 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g020528 | 2:32,715,483-32,727,747 | + | C1H2g11087 | C2H2g10655 | LOC_Os02g58410 | Os02g0830900 | - | Detail |
| CX2g021714 | 2:32,728,963-32,732,085 | + | C1H2g31609 | C2H2g19559 | LOC_Os02g58440 | Os02g0831100 | - | Detail |
| CX2g024319 | 2:32,732,783-32,734,284 | - | C1H2g06401 | C2H2g28296 | LOC_Os02g58450 | Os02g0831200 | - | Detail |
| CX2g019335 | 2:32,734,740-32,738,161 | - | C1H2g24307 | C2H2g15828 | LOC_Os02g58460 | Os02g0831300 | - | Detail |
| CX2g019757 | 2:32,738,958-32,740,512 | - | C1H2g27225 | C2H2g19806 | LOC_Os02g58470 | Os02g0831400 | - | Detail |
| CX2g023057 | 2:32,741,585-32,741,776 | + | - | - | - | - | - | Detail |
| CX2g021473 | 2:32,742,300-32,746,313 | + | C1H2g26348 | C2H2g04977 | LOC_Os02g58480 | Os02g0831500 | - | Detail |
| CX2g020627 | 2:32,746,787-32,753,770 | - | C1H2g08362 | C2H2g27331 | LOC_Os02g58490 | Os02g0831600 | OsAGO1, AGO1 | Detail |
| CX2g024485 | 2:32,755,850-32,757,143 | - | C1H2g10055 | C2H2g04523 | LOC_Os02g58500 | Os02g0831700 | PLA2-I | Detail |