| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g07624 | 3:7,197,418-7,199,618 | + | C1H3g15012 | CX3g027887 | LOC_Os03g14950 | Os03g0254400 | - | Detail |
| C2H3g23799 | 3:7,204,135-7,204,413 | - | C1H3g14658 | CX3g029818 | - | - | - | Detail |
| C2H3g04070 | 3:7,208,505-7,218,353 | - | C1H3g26948 | - | - | - | - | Detail |
| C2H3g05698 | 3:7,220,850-7,224,713 | - | C1H3g12429 | CX3g030250 | LOC_Os03g14990 | Os03g0254800 | - | Detail |
| C2H3g27981 | 3:7,225,203-7,229,435 | - | C1H3g29260 | CX3g028925 | LOC_Os03g15000 | Os03g0254900 | - | Detail |
| C2H3g19768 | 3:7,235,824-7,238,850 | + | C1H3g29943 | CX3g027619 | LOC_Os03g15010 | Os03g0255000 | - | Detail |
| C2H3g22717 | 3:7,240,015-7,246,318 | - | C1H3g18791 | CX3g028831 | LOC_Os03g15020 | Os03g0255100 | - | Detail |
| C2H3g05629 | 3:7,252,250-7,255,573 | - | C1H3g09921 | CX3g025198 | LOC_Os03g15033 | Os03g0255200 | - | Detail |
| C2H3g25452 | 3:7,256,536-7,262,119 | + | C1H3g18545 | CX3g026675 | LOC_Os03g15040 | Os03g0255400 | - | Detail |
| C2H3g13946 | 3:7,263,655-7,269,198 | - | C1H3g28815 | CX3g027919 | LOC_Os03g15050 | Os03g0255500 | - | Detail |
| C2H3g02274 | 3:7,282,183-7,283,099 | - | C1H3g15643 | CX3g026544 | - | Os03g0255900 | - | Detail |
| C2H3g16394 | 3:7,292,523-7,297,554 | - | C1H3g10127 | CX3g029004 | LOC_Os03g15120 | Os03g0256400 | - | Detail |
| C2H3g29398 | 3:7,299,703-7,309,547 | - | C1H3g29561 | CX3g027278 | LOC_Os03g11140 | Os03g0256800 | - | Detail |
| C2H3g13682 | 3:7,312,299-7,315,307 | - | C1H3g02917 | CX3g030888 | LOC_Os03g15190 | Os03g0257000 | - | Detail |
| C2H3g28753 | 3:7,321,757-7,322,625 | - | C1H3g17145 | CX3g026307 | LOC_Os03g15210 | Os03g0257500 | - | Detail |
| C2H3g29554 | 3:7,329,371-7,330,236 | - | C1H3g20346 | CX3g026307 | LOC_Os03g15220 | Os03g0257500 | - | Detail |
| C2H3g21076 | 3:7,331,986-7,335,075 | - | C1H3g29683 | CX3g026307 | - | Os09g0310800 | - | Detail |
| C2H3g13156 | 3:7,335,511-7,338,158 | - | C1H3g04833 | CX3g026307 | LOC_Os03g15230 | Os03g0257600 | - | Detail |
| C2H3g04251 | 3:7,342,346-7,344,220 | + | C1H3g17923 | CX3g028163 | LOC_Os03g15240 | Os03g0257900 | - | Detail |
| C2H3g19447 | 3:7,344,676-7,349,391 | - | C1H3g28844 | CX3g030006 | LOC_Os03g15250 | Os03g0258000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021877 | 2:32,658,579-32,662,081 | + | C1H2g22040 | C2H2g08873 | LOC_Os02g58250 | Os02g0829400 | - | Detail |
| CX2g020227 | 2:32,662,742-32,665,825 | - | C1H2g19670 | C2H2g06590 | LOC_Os02g58260 | Os02g0829500 | - | Detail |
| CX2g023481 | 2:32,666,268-32,669,896 | - | C1H2g11754 | C2H2g01627 | LOC_Os02g58280 | Os02g0829600 | - | Detail |
| CX2g021237 | 2:32,673,516-32,674,790 | - | C1H2g30265 | C2H2g10073 | LOC_Os02g58300 | Os02g0829800 | - | Detail |
| CX2g019654 | 2:32,675,393-32,678,416 | - | C1H2g28907 | C2H2g27848 | LOC_Os02g58310 | Os02g0829900 | - | Detail |
| CX2g021002 | 2:32,680,574-32,685,372 | - | C1H2g15905 | C2H2g28933 | LOC_Os02g58340 | Os02g0830100 | - | Detail |
| CX2g021148 | 2:32,686,391-32,687,178 | - | C1H2g26748 | C2H2g24710 | LOC_Os02g58350 | Os02g0830200 | RR3, OSRR3, OsRR3, rr3, Rra7, OsRRA7 | Detail |
| CX2g019480 | 2:32,690,445-32,696,207 | - | C1H2g04850 | C2H2g15978 | LOC_Os02g58360 | Os02g0830300 | - | Detail |
| CX2g021651 | 2:32,698,367-32,698,825 | - | - | - | LOC_Os02g58370 | - | - | Detail |
| CX2g019366 | 2:32,702,776-32,707,097 | - | C1H2g28740 | C2H2g05318 | LOC_Os02g58390 | Os02g0830700 | - | Detail |
| CX2g022335 | 2:32,709,568-32,709,747 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g020528 | 2:32,715,483-32,727,747 | + | C1H2g11087 | C2H2g10655 | LOC_Os02g58410 | Os02g0830900 | - | Detail |
| CX2g021714 | 2:32,728,963-32,732,085 | + | C1H2g31609 | C2H2g19559 | LOC_Os02g58440 | Os02g0831100 | - | Detail |
| CX2g024319 | 2:32,732,783-32,734,284 | - | C1H2g06401 | C2H2g28296 | LOC_Os02g58450 | Os02g0831200 | - | Detail |
| CX2g019335 | 2:32,734,740-32,738,161 | - | C1H2g24307 | C2H2g15828 | LOC_Os02g58460 | Os02g0831300 | - | Detail |
| CX2g019757 | 2:32,738,958-32,740,512 | - | C1H2g27225 | C2H2g19806 | LOC_Os02g58470 | Os02g0831400 | - | Detail |
| CX2g023057 | 2:32,741,585-32,741,776 | + | - | - | - | - | - | Detail |
| CX2g021473 | 2:32,742,300-32,746,313 | + | C1H2g26348 | C2H2g04977 | LOC_Os02g58480 | Os02g0831500 | - | Detail |
| CX2g020627 | 2:32,746,787-32,753,770 | - | C1H2g08362 | C2H2g27331 | LOC_Os02g58490 | Os02g0831600 | OsAGO1, AGO1 | Detail |
| CX2g024485 | 2:32,755,850-32,757,143 | - | C1H2g10055 | C2H2g04523 | LOC_Os02g58500 | Os02g0831700 | PLA2-I | Detail |