| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g12726 | 1:34,938,831-34,939,619 | + | C2H1g20697 | CX1g003493 | LOC_Os01g67950 | Os01g0907200 | - | Detail |
| C1H1g26541 | 1:34,942,504-34,947,620 | + | C2H1g10610 | CX1g004144 | LOC_Os01g67960 | Os01g0907300 | - | Detail |
| C1H1g18538 | 1:34,948,320-34,955,231 | + | C2H1g19705 | CX1g000822 | LOC_Os01g67970 | Os01g0907400 | JMJ705 | Detail |
| C1H1g19874 | 1:34,956,430-34,957,545 | + | C2H1g29254 | CX1g000036 | LOC_Os01g67980 | Os01g0907600 | OsSAG12-1 | Detail |
| C1H1g08768 | 1:34,972,914-34,976,480 | + | C2H1g19503 | CX1g000912 | LOC_Os01g68000 | Os01g0907900 | PLA2, pla2, pla2(pla2-1, pla2-2), plt2, LHD2 | Detail |
| C1H1g13810 | 1:34,987,033-34,989,975 | - | C2H1g14371 | CX1g000788 | LOC_Os01g68010 | Os01g0908100 | - | Detail |
| C1H1g00934 | 1:34,993,325-34,997,431 | + | C2H1g27794 | CX1g002877 | LOC_Os01g68020 | Os01g0908200 | OsBT | Detail |
| C1H1g26380 | 1:34,998,549-34,999,821 | - | C2H1g06918 | CX1g005492 | LOC_Os01g68030 | Os01g0908400 | - | Detail |
| C1H1g26157 | 1:35,001,120-35,004,353 | - | C2H1g30537 | CX1g002681 | LOC_Os01g68040 | Os01g0908500 | - | Detail |
| C1H1g02663 | 1:35,011,447-35,013,794 | + | C2H1g27819 | CX1g003019 | LOC_Os01g68050 | Os01g0908600 | OsProT1 | Detail |
| C1H1g28238 | 1:35,014,156-35,018,530 | - | C2H1g20684 | CX1g003471 | LOC_Os01g68060 | Os01g0908700 | - | Detail |
| C1H1g12819 | 1:35,026,038-35,027,558 | + | C2H1g22636 | CX1g001370 | LOC_Os01g68070 | Os01g0908800 | - | Detail |
| C1H1g18966 | 1:35,031,109-35,032,479 | - | - | CX1g007120 | LOC_Os01g68090 | Os01g0909000 | - | Detail |
| C1H1g09218 | 1:35,033,587-35,036,812 | + | C2H1g29519 | CX1g001897 | LOC_Os01g68104 | Os01g0909100 | - | Detail |
| C1H1g22460 | 1:35,039,709-35,040,078 | - | C2H1g05938 | - | - | Os01g0909150 | - | Detail |
| C1H1g21604 | 1:35,041,397-35,051,861 | - | C2H1g23470 | CX1g001307 | LOC_Os01g68120 | Os01g0909200 | OsDCL3a | Detail |
| C1H1g09277 | 1:35,055,480-35,055,878 | + | C2H1g03983 | CX1g000844 | LOC_Os01g68130 | - | - | Detail |
| C1H1g24131 | 1:35,056,030-35,059,812 | + | C2H1g03983 | CX1g000844 | LOC_Os01g68130 | Os01g0909300 | - | Detail |
| C1H1g09913 | 1:35,060,666-35,061,631 | - | - | CX1g002611 | LOC_Os01g68140 | Os01g0909400 | - | Detail |
| C1H1g04879 | 1:35,067,984-35,071,444 | + | C2H1g20920 | CX1g003036 | LOC_Os01g68260 | Os01g0971200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g021224 | 2:32,357,961-32,364,192 | + | C1H2g07473 | C2H2g20143 | LOC_Os02g57760 | Os02g0823400 | COMT2 | Detail |
| CX2g023308 | 2:32,360,529-32,360,867 | - | - | - | - | - | - | Detail |
| CX2g021746 | 2:32,364,560-32,366,204 | - | C1H2g07620 | C2H2g30514 | - | Os02g0823600 | - | Detail |
| CX2g020179 | 2:32,367,111-32,369,001 | - | C1H2g27003 | C2H2g01115 | LOC_Os02g57770 | Os02g0823700 | - | Detail |
| CX2g021167 | 2:32,369,616-32,373,994 | + | C1H2g28434 | C2H2g11155 | LOC_Os02g57780 | Os02g0823800 | - | Detail |
| CX2g024705 | 2:32,379,985-32,381,064 | + | - | - | - | - | - | Detail |
| CX2g022048 | 2:32,390,679-32,393,489 | - | C1H2g31329 | C2H2g25346 | LOC_Os02g57800 | Os02g0824000 | - | Detail |
| CX2g020776 | 2:32,398,787-32,399,062 | + | - | - | - | Os02g0188201 | - | Detail |
| CX2g021425 | 2:32,401,228-32,402,820 | + | C1H2g04626 | C2H2g15803 | LOC_Os02g57810 | Os02g0824100 | - | Detail |
| CX2g022643 | 2:32,407,773-32,410,969 | - | C1H2g23852 | C2H2g15228 | LOC_Os02g57820 | Os02g0824300 | OsAHL5 | Detail |
| CX2g019084 | 2:32,416,372-32,417,451 | + | C1H2g00173 | C2H2g06569 | LOC_Os02g57840 | Os02g0824500 | - | Detail |
| CX2g020693 | 2:32,418,496-32,419,513 | - | C1H2g03458 | C2H2g20433 | LOC_Os02g57850 | Os02g0824600 | - | Detail |
| CX2g018911 | 2:32,420,057-32,422,588 | + | C1H4g09732 | C2H2g13039 | LOC_Os02g57854 | Os02g0824700 | - | Detail |
| CX2g021161 | 2:32,464,718-32,466,743 | + | C1H2g11587 | C2H2g05583 | LOC_Os02g57990 | Os02g0826200 | - | Detail |
| CX2g018881 | 2:32,468,850-32,469,119 | + | - | C2H2g23286 | LOC_Os02g58000 | Os02g0826300 | - | Detail |
| CX2g022373 | 2:32,486,099-32,486,492 | + | C1H2g23547 | C2H2g20068 | - | - | - | Detail |
| CX2g021686 | 2:32,490,346-32,497,480 | - | C1H2g00767 | C2H2g14467 | LOC_Os02g58030 | Os02g0826600 | OsIRL6 | Detail |
| CX2g021433 | 2:32,519,771-32,519,926 | - | - | - | - | - | - | Detail |
| CX2g020112 | 2:32,520,917-32,521,339 | - | - | - | LOC_Os02g39940 | - | - | Detail |
| CX2g021789 | 2:32,524,877-32,525,131 | - | C1H2g26730 | C2H2g11560 | LOC_Os02g47870 | Os02g0743100 | OsBIRF1 | Detail |