| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g03283 | 3:31,750,330-31,751,957 | - | C1H3g12556 | CX3g030607 | LOC_Os03g61270 | Os03g0828300 | - | Detail |
| C2H3g18546 | 3:31,757,601-31,759,139 | - | C1H3g04822 | CX3g029024 | LOC_Os03g61260 | Os03g0828100 | OsPRPL18 | Detail |
| C2H3g08381 | 3:31,762,816-31,765,445 | - | C1H3g26131 | CX3g026632 | LOC_Os03g61330 | Os03g0829000 | - | Detail |
| C2H3g25590 | 3:31,766,052-31,768,641 | - | C1H3g15915 | CX3g028011 | LOC_Os03g61340 | Os03g0829100 | - | Detail |
| C2H3g24696 | 3:31,769,426-31,772,607 | - | C1H3g03162 | CX3g026642 | LOC_Os03g61360 | Os03g0829200 | - | Detail |
| C2H3g26698 | 3:31,770,274-31,770,820 | + | C1H3g09916 | CX3g030512 | LOC_Os03g64340 | Os03g0829466 | - | Detail |
| C2H3g05880 | 3:31,778,758-31,779,428 | - | C1H3g23073 | CX3g025854 | LOC_Os03g61470 | Os03g0830400 | - | Detail |
| C2H3g17673 | 3:31,782,442-31,783,339 | - | C1H3g23073 | CX3g025854 | LOC_Os03g61440 | Os03g0829900 | OsFWL4 | Detail |
| C2H3g24444 | 3:31,786,174-31,791,693 | + | C1H10g15679 | - | - | - | - | Detail |
| C2H3g04636 | 3:31,793,778-31,794,478 | - | C1H3g07645 | CX3g025854 | LOC_Os03g61470 | Os03g0830200 | OsCNR10 | Detail |
| C2H3g11706 | 3:31,795,469-31,796,771 | + | C1H3g06410 | CX3g028250 | - | Os03g0206700 | - | Detail |
| C2H3g19882 | 3:31,800,078-31,803,074 | - | C1H3g25802 | CX3g026525 | LOC_Os03g61500 | Os03g0830400 | - | Detail |
| C2H3g03602 | 3:31,803,385-31,803,961 | - | C1H3g25802 | CX3g025854 | LOC_Os03g61470 | Os03g0830400 | - | Detail |
| C2H3g26647 | 3:31,805,366-31,805,719 | - | C1H3g23073 | CX3g025854 | LOC_Os03g61500 | Os03g0830400 | - | Detail |
| C2H3g22051 | 3:31,810,910-31,811,562 | - | C1H3g28428 | CX3g025854 | LOC_Os03g61500 | Os03g0830500 | OsFWL7 | Detail |
| C2H3g06697 | 3:31,818,779-31,823,973 | - | C1H3g03284 | CX3g029618 | LOC_Os03g61540 | Os03g0830900 | - | Detail |
| C2H3g08869 | 3:31,828,256-31,829,443 | + | C1H3g14942 | CX3g028759 | LOC_Os03g61550 | Os03g0831000 | - | Detail |
| C2H3g09913 | 3:31,829,771-31,835,212 | - | C1H3g25915 | CX3g026737 | LOC_Os03g61560 | Os03g0831100 | - | Detail |
| C2H3g11440 | 3:31,836,649-31,838,057 | + | C1H3g22820 | CX3g028619 | LOC_Os03g61570 | Os03g0831200 | GATA12 | Detail |
| C2H3g03666 | 3:31,841,906-31,845,417 | + | C1H3g04867 | CX3g030545 | LOC_Os03g61580 | Os03g0831300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023890 | 2:32,099,992-32,103,412 | - | C1H2g18181 | C2H2g04028 | LOC_Os02g57330 | Os02g0818700 | - | Detail |
| CX2g022489 | 2:32,104,584-32,108,441 | + | C1H2g26889 | C2H2g08224 | LOC_Os02g57340 | Os02g0818800 | - | Detail |
| CX2g022485 | 2:32,114,094-32,118,015 | + | C1H2g23220 | C2H2g12160 | LOC_Os02g57360 | Os02g0818900 | - | Detail |
| CX2g024130 | 2:32,118,527-32,118,682 | - | C1H4g20138 | - | - | - | - | Detail |
| CX2g023697 | 2:32,138,399-32,139,488 | + | C1H2g05057 | C2H2g09349 | LOC_Os02g57370 | Os02g0819100 | OsDHHC1 | Detail |
| CX2g023843 | 2:32,147,190-32,151,618 | + | C1H2g16081 | C2H2g11888 | LOC_Os02g57390 | Os02g0819300 | - | Detail |
| CX2g024818 | 2:32,152,788-32,157,107 | - | C1H2g29375 | C2H2g23556 | LOC_Os02g57400 | Os02g0819400 | LPA1, OsLpa1.3, Oslpa1, Lpa1, OsLpa1 | Detail |
| CX2g021396 | 2:32,159,919-32,160,113 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g019514 | 2:32,161,908-32,164,840 | - | C1H2g01387 | C2H2g04446 | LOC_Os02g57410 | Os02g0819500 | - | Detail |
| CX2g023750 | 2:32,174,213-32,176,644 | - | C1H2g02066 | C2H2g12705 | LOC_Os02g57420 | Os02g0819600 | - | Detail |
| CX2g022484 | 2:32,182,946-32,184,013 | - | C1H2g26145 | C2H2g21639 | LOC_Os02g57430 | Os02g0819700 | - | Detail |
| CX2g022770 | 2:32,188,477-32,189,679 | + | C1H2g31294 | C2H2g10374 | LOC_Os02g57440 | Os02g0819900 | - | Detail |
| CX2g019574 | 2:32,192,179-32,194,268 | - | C1H2g00613 | C2H2g05211 | LOC_Os02g57450 | Os02g0820000 | - | Detail |
| CX2g019900 | 2:32,194,486-32,194,740 | + | - | - | - | Os02g0820100 | - | Detail |
| CX2g020491 | 2:32,201,418-32,203,968 | - | C1H2g19315 | C2H2g24658 | LOC_Os02g57470 | Os02g0820300 | - | Detail |
| CX2g020751 | 2:32,206,855-32,208,222 | - | C1H2g17511 | C2H2g13909 | LOC_Os02g57480 | Os02g0820400 | - | Detail |
| CX2g023897 | 2:32,212,670-32,213,433 | - | C1H2g27419 | C2H2g13334 | LOC_Os02g57490 | Os02g0820500 | DH1, LBD16 | Detail |
| CX2g020258 | 2:32,215,968-32,218,844 | - | C1H2g06878 | C2H2g23527 | LOC_Os02g57500 | Os02g0820600 | - | Detail |
| CX2g019670 | 2:32,221,196-32,222,604 | + | C1H2g20124 | C2H2g15378 | LOC_Os02g57510 | Os02g0820700 | - | Detail |
| CX2g022783 | 2:32,236,939-32,240,312 | + | C1H2g08194 | C2H2g05580 | LOC_Os02g57530 | Os02g0820900 | ETR3, ETR3, OsETR3, OS-ETR3, OsETR3a, OsETR3b, OsPK2, PK2, OsERS4 | Detail |