| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g11407 | 1:9,023,639-9,023,920 | - | - | - | LOC_Os01g17980 | - | - | Detail |
| C2H1g22929 | 1:9,028,394-9,032,997 | + | C1H1g00974 | CX1g006919 | LOC_Os01g17990 | - | - | Detail |
| C2H1g07113 | 1:9,058,742-9,062,526 | - | C1H1g19330 | CX1g000239 | LOC_Os01g18050 | Os01g0282800 | OsTUB1 | Detail |
| C2H1g14204 | 1:9,073,023-9,078,255 | - | C1H1g12917 | CX1g003294 | LOC_Os01g18060 | Os01g0283000 | - | Detail |
| C2H1g26601 | 1:9,078,275-9,082,841 | + | C1H1g28761 | CX1g007053 | LOC_Os01g18070 | Os01g0283100 | - | Detail |
| C2H1g01489 | 1:9,095,726-9,096,517 | + | - | - | LOC_Os01g18080 | Os01g0283300 | - | Detail |
| C2H1g29322 | 1:9,097,981-9,098,328 | + | - | CX1g005891 | LOC_Os01g18090 | Os01g0283400 | - | Detail |
| C2H1g04439 | 1:9,099,489-9,101,501 | - | C1H1g04332 | CX1g005282 | LOC_Os01g18100 | Os01g0283500 | - | Detail |
| C2H1g27306 | 1:9,111,838-9,113,757 | + | C1H1g15010 | CX1g001578 | LOC_Os01g18110 | Os01g0283600 | - | Detail |
| C2H1g06247 | 1:9,118,383-9,121,287 | - | C1H1g08875 | CX1g006385 | - | Os05g0435500 | - | Detail |
| C2H1g08442 | 1:9,121,349-9,121,684 | + | C1H1g09834 | - | - | - | - | Detail |
| C2H1g27708 | 1:9,123,503-9,126,848 | + | C1H1g15010 | CX1g005965 | LOC_Os01g18120 | Os01g0283700 | - | Detail |
| C2H1g22354 | 1:9,131,494-9,132,603 | + | C1H1g31050 | CX1g005156 | LOC_Os01g18150 | Os01g0284300 | - | Detail |
| C2H1g13905 | 1:9,134,569-9,135,338 | - | C1H1g09627 | CX1g002731 | LOC_Os01g18170 | Os01g0284500 | OsGER4 | Detail |
| C2H1g17254 | 1:9,142,721-9,145,663 | + | C1H1g10680 | CX1g000924 | LOC_Os01g18210 | Os01g0284700 | - | Detail |
| C2H1g07308 | 1:9,150,165-9,152,540 | - | C1H1g13588 | CX1g001111 | LOC_Os01g18220 | Os01g0284900 | - | Detail |
| C2H1g20440 | 1:9,158,775-9,159,592 | - | C1H1g17641 | CX1g003253 | LOC_Os01g18230 | Os01g0759700 | - | Detail |
| C2H1g10789 | 1:9,167,708-9,169,939 | - | C1H1g06479 | CX1g006251 | LOC_Os01g18240 | Os01g0285300 | MYB61, OsMYB55/61, JMTF1 | Detail |
| C2H1g03219 | 1:9,209,366-9,212,756 | + | C1H1g05697 | CX1g000217 | LOC_Os01g18280 | Os01g0286000 | - | Detail |
| C2H1g23388 | 1:9,217,932-9,221,431 | - | C1H1g18723 | CX1g006989 | LOC_Os01g02110 | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g023890 | 2:32,099,992-32,103,412 | - | C1H2g18181 | C2H2g04028 | LOC_Os02g57330 | Os02g0818700 | - | Detail |
| CX2g022489 | 2:32,104,584-32,108,441 | + | C1H2g26889 | C2H2g08224 | LOC_Os02g57340 | Os02g0818800 | - | Detail |
| CX2g022485 | 2:32,114,094-32,118,015 | + | C1H2g23220 | C2H2g12160 | LOC_Os02g57360 | Os02g0818900 | - | Detail |
| CX2g024130 | 2:32,118,527-32,118,682 | - | C1H4g20138 | - | - | - | - | Detail |
| CX2g023697 | 2:32,138,399-32,139,488 | + | C1H2g05057 | C2H2g09349 | LOC_Os02g57370 | Os02g0819100 | OsDHHC1 | Detail |
| CX2g023843 | 2:32,147,190-32,151,618 | + | C1H2g16081 | C2H2g11888 | LOC_Os02g57390 | Os02g0819300 | - | Detail |
| CX2g024818 | 2:32,152,788-32,157,107 | - | C1H2g29375 | C2H2g23556 | LOC_Os02g57400 | Os02g0819400 | LPA1, OsLpa1.3, Oslpa1, Lpa1, OsLpa1 | Detail |
| CX2g021396 | 2:32,159,919-32,160,113 | + | - | - | - | Os02g0630650 | - | Detail |
| CX2g019514 | 2:32,161,908-32,164,840 | - | C1H2g01387 | C2H2g04446 | LOC_Os02g57410 | Os02g0819500 | - | Detail |
| CX2g023750 | 2:32,174,213-32,176,644 | - | C1H2g02066 | C2H2g12705 | LOC_Os02g57420 | Os02g0819600 | - | Detail |
| CX2g022484 | 2:32,182,946-32,184,013 | - | C1H2g26145 | C2H2g21639 | LOC_Os02g57430 | Os02g0819700 | - | Detail |
| CX2g022770 | 2:32,188,477-32,189,679 | + | C1H2g31294 | C2H2g10374 | LOC_Os02g57440 | Os02g0819900 | - | Detail |
| CX2g019574 | 2:32,192,179-32,194,268 | - | C1H2g00613 | C2H2g05211 | LOC_Os02g57450 | Os02g0820000 | - | Detail |
| CX2g019900 | 2:32,194,486-32,194,740 | + | - | - | - | Os02g0820100 | - | Detail |
| CX2g020491 | 2:32,201,418-32,203,968 | - | C1H2g19315 | C2H2g24658 | LOC_Os02g57470 | Os02g0820300 | - | Detail |
| CX2g020751 | 2:32,206,855-32,208,222 | - | C1H2g17511 | C2H2g13909 | LOC_Os02g57480 | Os02g0820400 | - | Detail |
| CX2g023897 | 2:32,212,670-32,213,433 | - | C1H2g27419 | C2H2g13334 | LOC_Os02g57490 | Os02g0820500 | DH1, LBD16 | Detail |
| CX2g020258 | 2:32,215,968-32,218,844 | - | C1H2g06878 | C2H2g23527 | LOC_Os02g57500 | Os02g0820600 | - | Detail |
| CX2g019670 | 2:32,221,196-32,222,604 | + | C1H2g20124 | C2H2g15378 | LOC_Os02g57510 | Os02g0820700 | - | Detail |
| CX2g022783 | 2:32,236,939-32,240,312 | + | C1H2g08194 | C2H2g05580 | LOC_Os02g57530 | Os02g0820900 | ETR3, ETR3, OsETR3, OS-ETR3, OsETR3a, OsETR3b, OsPK2, PK2, OsERS4 | Detail |