| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08716 | 3:16,925,345-16,925,834 | + | C1H3g16844 | - | LOC_Os03g32330 | Os03g0438400 | - | Detail |
| C2H3g25901 | 3:16,975,364-16,976,902 | + | C1H3g27126 | CX3g028421 | LOC_Os03g32470 | Os03g0439500 | - | Detail |
| C2H3g00828 | 3:16,982,325-16,983,125 | - | C1H3g10649 | CX3g029614 | - | Os03g0114400 | - | Detail |
| C2H3g13437 | 3:17,025,684-17,027,541 | - | C1H3g06834 | CX3g025406 | LOC_Os03g32490 | Os03g0439700 | - | Detail |
| C2H3g15363 | 3:17,032,739-17,034,277 | + | C1H3g21761 | CX3g028175 | LOC_Os03g32499 | Os03g0439800 | - | Detail |
| C2H3g25565 | 3:17,052,831-17,055,209 | + | C1H3g11595 | CX3g026641 | LOC_Os03g32580 | Os03g0440900 | - | Detail |
| C2H3g20190 | 3:17,055,536-17,064,832 | - | C1H3g28711 | CX3g027696 | LOC_Os03g32590 | Os03g0441000 | - | Detail |
| C2H3g11825 | 3:17,074,561-17,077,071 | - | C1H3g12283 | CX3g025857 | LOC_Os03g32620 | Os03g0441400 | - | Detail |
| C2H3g07036 | 3:17,168,713-17,169,390 | + | C1H3g09033 | CX3g025420 | LOC_Os03g32790 | Os03g0442900 | - | Detail |
| C2H3g18530 | 3:17,316,196-17,316,901 | - | C1H3g08585 | CX3g029665 | LOC_Os03g33090 | Os03g0445700 | OsLBD37 | Detail |
| C2H3g30048 | 3:17,359,090-17,362,124 | + | C1H3g15486 | CX3g024950 | - | - | - | Detail |
| C2H3g30096 | 3:17,427,330-17,434,816 | - | C1H3g26264 | CX3g029845 | LOC_Os03g33580 | Os03g0448600 | - | Detail |
| C2H3g02896 | 3:17,446,012-17,452,485 | - | C1H3g27459 | CX3g025874 | LOC_Os03g33590 | Os03g0448700 | - | Detail |
| C2H3g09597 | 3:17,504,409-17,508,494 | + | C1H3g11876 | CX3g025469 | LOC_Os03g33650 | Os03g0449200 | SHL4, SHO2, SHO2/SHL4, OsAGO7 | Detail |
| C2H3g06387 | 3:17,573,773-17,577,321 | - | C1H3g10349 | CX3g028866 | LOC_Os03g33012 | Os03g0444900 | OsWRKY33, OsWRKY81 | Detail |
| C2H3g24450 | 3:17,583,817-17,584,173 | - | C1H3g26549 | - | - | Os03g0444900 | OsWRKY33, OsWRKY81 | Detail |
| C2H3g04259 | 3:17,695,517-17,699,643 | - | C1H3g16808 | CX3g031079 | LOC_Os03g34040 | Os03g0452300 | - | Detail |
| C2H3g26683 | 3:17,735,716-17,736,909 | + | - | CX3g027872 | - | Os03g0454300 | - | Detail |
| C2H3g20904 | 3:17,751,779-17,752,998 | + | C1H3g08800 | CX3g026859 | LOC_Os03g34280 | Os03g0453800 | - | Detail |
| C2H3g06895 | 3:17,755,871-17,758,744 | + | C1H3g13672 | CX3g026131 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019842 | 2:31,960,605-31,969,143 | + | C1H2g03514 | C2H2g29121 | LOC_Os02g57120 | Os02g0816300 | - | Detail |
| CX2g021019 | 2:31,972,758-31,975,977 | + | C1H2g22705 | C2H2g15969 | LOC_Os02g57140 | Os02g0816400 | - | Detail |
| CX2g020615 | 2:31,983,333-31,984,874 | + | C1H2g08028 | C2H2g14831 | LOC_Os02g57150 | Os02g0816500 | - | Detail |
| CX2g024238 | 2:31,985,523-31,989,668 | - | C1H2g13297 | C2H2g13853 | LOC_Os02g57160 | Os02g0816600 | - | Detail |
| CX2g021688 | 2:31,990,741-31,992,472 | - | C1H2g29075 | C2H2g04727 | LOC_Os02g57170 | Os02g0816700 | - | Detail |
| CX2g019354 | 2:31,992,779-31,996,474 | + | C1H2g16275 | C2H2g17597 | LOC_Os02g57180 | Os02g0816800 | OsNDUFA9, FLO13 | Detail |
| CX2g021988 | 2:32,018,243-32,030,720 | + | C1H2g06133 | C2H2g26727 | LOC_Os02g57190 | Os02g0816900 | OSMYOXIB | Detail |
| CX2g019948 | 2:32,031,727-32,036,732 | + | C1H2g05881 | C2H2g04285 | LOC_Os02g57200 | Os02g0817000 | - | Detail |
| CX2g024220 | 2:32,041,672-32,043,088 | + | C1H2g01056 | C2H2g10819 | LOC_Os02g57210 | - | - | Detail |
| CX2g021541 | 2:32,044,610-32,044,762 | + | - | - | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| CX2g024286 | 2:32,045,598-32,050,706 | - | C1H2g12935 | C2H2g05620 | LOC_Os02g57220 | Os02g0817200 | - | Detail |
| CX2g021309 | 2:32,053,037-32,057,087 | + | C1H2g30239 | C2H2g26600 | LOC_Os02g57240 | Os02g0817500 | - | Detail |
| CX2g020596 | 2:32,058,724-32,060,416 | - | C1H2g30753 | C2H2g18662 | LOC_Os02g57250 | Os02g0817600 | - | Detail |
| CX2g019038 | 2:32,065,738-32,069,053 | - | C1H2g06843 | C2H2g25584 | LOC_Os02g57260 | Os02g0817700 | - | Detail |
| CX2g019127 | 2:32,070,266-32,073,597 | - | C1H2g21810 | C2H2g16029 | LOC_Os02g57270 | Os02g0817800 | RTBP1, rtbp1, TBP1, OsTBP1 | Detail |
| CX2g021653 | 2:32,075,530-32,076,226 | - | - | - | - | - | - | Detail |
| CX2g024084 | 2:32,076,310-32,077,454 | + | C1H2g00976 | C2H2g17783 | LOC_Os02g57280 | Os02g0818000 | OsCBSX3 | Detail |
| CX2g022651 | 2:32,078,105-32,083,341 | - | C1H2g14875 | C2H2g09230 | LOC_Os02g57290 | Os02g0817900 | - | Detail |
| CX2g022656 | 2:32,089,948-32,090,106 | + | - | - | - | Os09g0341901 | - | Detail |
| CX2g023430 | 2:32,091,328-32,097,826 | - | C1H2g16141 | C2H2g21254 | LOC_Os02g57310 | Os02g0818450 | - | Detail |