| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g03703 | 3:9,006,778-9,009,726 | - | C1H3g30760 | CX3g027341 | LOC_Os03g18220 | Os03g0293500 | Ospdc2, PDC2 | Detail |
| C2H3g11690 | 3:9,009,998-9,011,311 | + | - | - | - | - | - | Detail |
| C2H3g08331 | 3:9,019,213-9,019,422 | - | C1H3g18943 | CX3g027094 | LOC_Os03g18250 | Os03g0293700 | - | Detail |
| C2H3g19683 | 3:9,019,437-9,019,757 | - | C1H3g20557 | CX3g026319 | LOC_Os03g18250 | Os03g0293700 | - | Detail |
| C2H3g29031 | 3:9,024,622-9,025,873 | - | C1H3g18167 | CX3g027241 | LOC_Os03g18290 | Os03g0294032 | - | Detail |
| C2H3g30268 | 3:9,027,368-9,029,461 | + | C1H3g14801 | CX3g028794 | LOC_Os03g18300 | Os03g0294100 | - | Detail |
| C2H3g05313 | 3:9,030,481-9,043,357 | + | C1H3g25931 | CX3g028900 | LOC_Os03g18310 | Os03g0294200 | OsF2KP2, FLO23 | Detail |
| C2H3g04577 | 3:9,051,518-9,052,437 | + | C1H3g00522 | CX3g027503 | LOC_Os03g18340 | - | - | Detail |
| C2H3g01948 | 3:9,054,014-9,058,404 | - | C1H3g23335 | CX3g028771 | LOC_Os03g18350 | Os03g0294600 | - | Detail |
| C2H3g16769 | 3:9,068,071-9,072,726 | + | C1H3g31328 | CX3g027365 | LOC_Os03g18360 | Os03g0294700 | OsETOL1, OsSTA97 | Detail |
| C2H3g29602 | 3:9,075,493-9,078,907 | - | C1H3g11627 | CX3g025695 | LOC_Os03g18370 | Os03g0294800 | - | Detail |
| C2H3g22783 | 3:9,082,233-9,088,594 | - | C1H3g24108 | CX3g025838 | LOC_Os03g18380 | Os03g0294900 | - | Detail |
| C2H3g30641 | 3:9,089,377-9,094,160 | - | C1H3g20168 | CX3g025257 | LOC_Os03g18410 | Os03g0295400 | - | Detail |
| C2H3g21153 | 3:9,094,288-9,097,851 | + | C1H3g08126 | CX3g028581 | LOC_Os03g18420 | Os03g0295500 | - | Detail |
| C2H3g02295 | 3:9,100,743-9,104,215 | - | C1H3g20275 | CX3g030446 | LOC_Os03g18430 | Os03g0295600 | - | Detail |
| C2H3g07925 | 3:9,110,098-9,121,516 | + | C1H3g31205 | CX3g025269 | LOC_Os03g18440 | Os03g0295700 | - | Detail |
| C2H3g21710 | 3:9,121,764-9,123,204 | - | C1H3g26210 | CX3g031348 | LOC_Os03g18454 | Os03g0295800 | - | Detail |
| C2H3g11997 | 3:9,125,149-9,125,427 | - | C1H3g13974 | CX3g027991 | LOC_Os03g18454 | Os03g0295800 | - | Detail |
| C2H3g28045 | 3:9,126,054-9,127,955 | - | C1H3g12024 | CX3g025833 | LOC_Os03g18470 | Os03g0295866 | - | Detail |
| C2H3g22218 | 3:9,129,284-9,132,179 | - | C1H3g21811 | CX3g028946 | LOC_Os03g18480 | Os03g0296000 | OsTDF1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019842 | 2:31,960,605-31,969,143 | + | C1H2g03514 | C2H2g29121 | LOC_Os02g57120 | Os02g0816300 | - | Detail |
| CX2g021019 | 2:31,972,758-31,975,977 | + | C1H2g22705 | C2H2g15969 | LOC_Os02g57140 | Os02g0816400 | - | Detail |
| CX2g020615 | 2:31,983,333-31,984,874 | + | C1H2g08028 | C2H2g14831 | LOC_Os02g57150 | Os02g0816500 | - | Detail |
| CX2g024238 | 2:31,985,523-31,989,668 | - | C1H2g13297 | C2H2g13853 | LOC_Os02g57160 | Os02g0816600 | - | Detail |
| CX2g021688 | 2:31,990,741-31,992,472 | - | C1H2g29075 | C2H2g04727 | LOC_Os02g57170 | Os02g0816700 | - | Detail |
| CX2g019354 | 2:31,992,779-31,996,474 | + | C1H2g16275 | C2H2g17597 | LOC_Os02g57180 | Os02g0816800 | OsNDUFA9, FLO13 | Detail |
| CX2g021988 | 2:32,018,243-32,030,720 | + | C1H2g06133 | C2H2g26727 | LOC_Os02g57190 | Os02g0816900 | OSMYOXIB | Detail |
| CX2g019948 | 2:32,031,727-32,036,732 | + | C1H2g05881 | C2H2g04285 | LOC_Os02g57200 | Os02g0817000 | - | Detail |
| CX2g024220 | 2:32,041,672-32,043,088 | + | C1H2g01056 | C2H2g10819 | LOC_Os02g57210 | - | - | Detail |
| CX2g021541 | 2:32,044,610-32,044,762 | + | - | - | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| CX2g024286 | 2:32,045,598-32,050,706 | - | C1H2g12935 | C2H2g05620 | LOC_Os02g57220 | Os02g0817200 | - | Detail |
| CX2g021309 | 2:32,053,037-32,057,087 | + | C1H2g30239 | C2H2g26600 | LOC_Os02g57240 | Os02g0817500 | - | Detail |
| CX2g020596 | 2:32,058,724-32,060,416 | - | C1H2g30753 | C2H2g18662 | LOC_Os02g57250 | Os02g0817600 | - | Detail |
| CX2g019038 | 2:32,065,738-32,069,053 | - | C1H2g06843 | C2H2g25584 | LOC_Os02g57260 | Os02g0817700 | - | Detail |
| CX2g019127 | 2:32,070,266-32,073,597 | - | C1H2g21810 | C2H2g16029 | LOC_Os02g57270 | Os02g0817800 | RTBP1, rtbp1, TBP1, OsTBP1 | Detail |
| CX2g021653 | 2:32,075,530-32,076,226 | - | - | - | - | - | - | Detail |
| CX2g024084 | 2:32,076,310-32,077,454 | + | C1H2g00976 | C2H2g17783 | LOC_Os02g57280 | Os02g0818000 | OsCBSX3 | Detail |
| CX2g022651 | 2:32,078,105-32,083,341 | - | C1H2g14875 | C2H2g09230 | LOC_Os02g57290 | Os02g0817900 | - | Detail |
| CX2g022656 | 2:32,089,948-32,090,106 | + | - | - | - | Os09g0341901 | - | Detail |
| CX2g023430 | 2:32,091,328-32,097,826 | - | C1H2g16141 | C2H2g21254 | LOC_Os02g57310 | Os02g0818450 | - | Detail |