| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g26824 | 5:22,539,796-22,540,670 | + | C1H5g29960 | CX5g040694 | LOC_Os05g43240 | Os05g0541800 | - | Detail |
| C2H5g22825 | 5:22,541,243-22,542,775 | - | C1H5g10948 | CX5g039692 | LOC_Os05g46430 | Os05g0541900 | - | Detail |
| C2H5g27157 | 5:22,546,775-22,547,041 | - | C1H5g24953 | CX5g039049 | LOC_Os05g46440 | Os05g0542001 | - | Detail |
| C2H5g28898 | 5:22,547,597-22,550,385 | - | C1H5g29646 | CX5g040991 | LOC_Os05g46450 | Os05g0542100 | - | Detail |
| C2H5g10686 | 5:22,552,795-22,556,824 | - | C1H5g28336 | CX5g040398 | LOC_Os05g46460 | Os05g0542200 | - | Detail |
| C2H5g01306 | 5:22,562,391-22,563,212 | - | C1H5g22742 | - | LOC_Os05g46470 | Os05g0542300 | - | Detail |
| C2H5g20940 | 5:22,566,991-22,567,960 | + | C1H5g09305 | CX5g039111 | LOC_Os05g46480 | Os05g0542500 | OsLEA3-1 | Detail |
| C2H5g28006 | 5:22,570,469-22,575,907 | + | C1H5g16366 | CX5g038812 | LOC_Os05g46490 | Os05g0542600 | - | Detail |
| C2H5g00090 | 5:22,576,971-22,577,303 | + | C1H5g17509 | CX5g036843 | LOC_Os05g46500 | Os05g0542732 | - | Detail |
| C2H5g29209 | 5:22,579,557-22,582,434 | + | C1H5g04581 | CX5g038839 | LOC_Os05g46510 | Os05g0542800 | - | Detail |
| C2H5g29484 | 5:22,582,645-22,585,166 | + | C1H5g22788 | CX5g037613 | LOC_Os05g46520 | Os05g0542900 | - | Detail |
| C2H5g09269 | 5:22,587,092-22,588,125 | + | C1H5g21931 | CX5g040487 | LOC_Os05g46530 | Os05g0543000 | OSIPP3 | Detail |
| C2H5g29215 | 5:22,591,248-22,594,627 | - | C1H5g12205 | CX5g038871 | LOC_Os05g46550 | Os05g0543100 | - | Detail |
| C2H5g26031 | 5:22,595,364-22,598,453 | + | C1H5g11939 | CX5g038262 | LOC_Os05g46560 | Os05g0543200 | - | Detail |
| C2H5g16707 | 5:22,599,960-22,602,662 | + | C1H5g08116 | CX5g036803 | LOC_Os05g46570 | Os05g0543300 | - | Detail |
| C2H5g01982 | 5:22,603,608-22,606,845 | - | C1H5g14558 | CX5g038659 | LOC_Os05g46580 | Os05g0543400 | - | Detail |
| C2H5g14629 | 5:22,610,907-22,611,393 | + | C1H5g03603 | CX5g038075 | LOC_Os03g57910 | Os05g0123100 | OsGT43A | Detail |
| C2H5g18850 | 5:22,627,450-22,628,602 | + | C1H5g29668 | CX5g040628 | LOC_Os05g46610 | Os05g0543600 | RLM1 | Detail |
| C2H5g12435 | 5:22,631,435-22,634,863 | - | C1H5g30521 | CX5g039679 | LOC_Os05g46620 | Os05g0543700 | - | Detail |
| C2H5g01174 | 5:22,635,754-22,638,826 | - | C1H5g07279 | CX5g038009 | LOC_Os05g46630 | Os05g0543800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019842 | 2:31,960,605-31,969,143 | + | C1H2g03514 | C2H2g29121 | LOC_Os02g57120 | Os02g0816300 | - | Detail |
| CX2g021019 | 2:31,972,758-31,975,977 | + | C1H2g22705 | C2H2g15969 | LOC_Os02g57140 | Os02g0816400 | - | Detail |
| CX2g020615 | 2:31,983,333-31,984,874 | + | C1H2g08028 | C2H2g14831 | LOC_Os02g57150 | Os02g0816500 | - | Detail |
| CX2g024238 | 2:31,985,523-31,989,668 | - | C1H2g13297 | C2H2g13853 | LOC_Os02g57160 | Os02g0816600 | - | Detail |
| CX2g021688 | 2:31,990,741-31,992,472 | - | C1H2g29075 | C2H2g04727 | LOC_Os02g57170 | Os02g0816700 | - | Detail |
| CX2g019354 | 2:31,992,779-31,996,474 | + | C1H2g16275 | C2H2g17597 | LOC_Os02g57180 | Os02g0816800 | OsNDUFA9, FLO13 | Detail |
| CX2g021988 | 2:32,018,243-32,030,720 | + | C1H2g06133 | C2H2g26727 | LOC_Os02g57190 | Os02g0816900 | OSMYOXIB | Detail |
| CX2g019948 | 2:32,031,727-32,036,732 | + | C1H2g05881 | C2H2g04285 | LOC_Os02g57200 | Os02g0817000 | - | Detail |
| CX2g024220 | 2:32,041,672-32,043,088 | + | C1H2g01056 | C2H2g10819 | LOC_Os02g57210 | - | - | Detail |
| CX2g021541 | 2:32,044,610-32,044,762 | + | - | - | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| CX2g024286 | 2:32,045,598-32,050,706 | - | C1H2g12935 | C2H2g05620 | LOC_Os02g57220 | Os02g0817200 | - | Detail |
| CX2g021309 | 2:32,053,037-32,057,087 | + | C1H2g30239 | C2H2g26600 | LOC_Os02g57240 | Os02g0817500 | - | Detail |
| CX2g020596 | 2:32,058,724-32,060,416 | - | C1H2g30753 | C2H2g18662 | LOC_Os02g57250 | Os02g0817600 | - | Detail |
| CX2g019038 | 2:32,065,738-32,069,053 | - | C1H2g06843 | C2H2g25584 | LOC_Os02g57260 | Os02g0817700 | - | Detail |
| CX2g019127 | 2:32,070,266-32,073,597 | - | C1H2g21810 | C2H2g16029 | LOC_Os02g57270 | Os02g0817800 | RTBP1, rtbp1, TBP1, OsTBP1 | Detail |
| CX2g021653 | 2:32,075,530-32,076,226 | - | - | - | - | - | - | Detail |
| CX2g024084 | 2:32,076,310-32,077,454 | + | C1H2g00976 | C2H2g17783 | LOC_Os02g57280 | Os02g0818000 | OsCBSX3 | Detail |
| CX2g022651 | 2:32,078,105-32,083,341 | - | C1H2g14875 | C2H2g09230 | LOC_Os02g57290 | Os02g0817900 | - | Detail |
| CX2g022656 | 2:32,089,948-32,090,106 | + | - | - | - | Os09g0341901 | - | Detail |
| CX2g023430 | 2:32,091,328-32,097,826 | - | C1H2g16141 | C2H2g21254 | LOC_Os02g57310 | Os02g0818450 | - | Detail |