| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19844 | 4:17,153,417-17,161,315 | - | C2H4g06643 | CX4g036045 | LOC_Os04g32880 | Os04g0401300 | - | Detail |
| C1H4g01351 | 4:17,182,271-17,187,924 | + | C2H4g23329 | CX4g035031 | LOC_Os04g32920 | Os04g0401700 | - | Detail |
| C1H4g00308 | 4:17,190,338-17,193,226 | - | C2H4g07669 | CX4g032032 | LOC_Os04g32930 | Os04g0401800 | OsSnm1 | Detail |
| C1H4g06913 | 4:17,195,511-17,202,757 | - | C2H4g08341 | CX4g033022 | LOC_Os04g32940 | Os04g0401900 | - | Detail |
| C1H4g17832 | 4:17,209,664-17,213,099 | - | C2H4g27588 | CX4g033505 | LOC_Os04g32950 | Os04g0402100 | - | Detail |
| C1H4g28962 | 4:17,217,527-17,225,945 | - | C2H4g29861 | CX4g033647 | LOC_Os04g32960 | Os04g0402200 | - | Detail |
| C1H4g29248 | 4:17,231,441-17,234,026 | + | C2H4g17148 | CX4g036231 | LOC_Os04g32970 | Os04g0402300 | - | Detail |
| C1H4g15778 | 4:17,245,410-17,246,442 | - | C2H4g06982 | CX4g035592 | LOC_Os04g32980 | Os04g0402500 | - | Detail |
| C1H4g07240 | 4:17,314,020-17,315,852 | + | C2H4g06461 | CX4g036153 | LOC_Os04g33030 | Os04g0403200 | - | Detail |
| C1H4g07835 | 4:17,326,685-17,330,588 | + | C2H4g07757 | CX4g034608 | LOC_Os04g33040 | Os04g0403300 | - | Detail |
| C1H4g10687 | 4:17,330,963-17,336,344 | + | C2H4g27026 | CX4g034506 | LOC_Os04g33050 | Os04g0403400 | - | Detail |
| C1H4g21762 | 4:17,336,861-17,340,691 | + | C2H4g06142 | CX4g033005 | LOC_Os04g33060 | Os04g0403500 | - | Detail |
| C1H4g16707 | 4:17,342,283-17,346,385 | - | C2H4g05650 | CX4g036347 | LOC_Os04g33080 | Os04g0403701 | - | Detail |
| C1H4g29160 | 4:17,361,082-17,361,786 | - | C2H4g08188 | CX4g031400 | LOC_Os04g33110 | Os04g0403900 | - | Detail |
| C1H4g22277 | 4:17,365,425-17,366,098 | - | C2H4g05726 | CX4g033687 | - | - | - | Detail |
| C1H4g01070 | 4:17,368,879-17,370,036 | - | C2H4g02595 | CX4g032114 | LOC_Os04g33150 | Os04g0404400 | TRD4.2 | Detail |
| C1H4g19552 | 4:17,381,677-17,386,633 | + | C2H4g12964 | CX4g035122 | LOC_Os04g33190 | Os04g0404800 | - | Detail |
| C1H4g09341 | 4:17,387,378-17,395,850 | - | C2H4g17158 | CX4g034399 | LOC_Os04g33200 | Os04g0404900 | - | Detail |
| C1H4g00203 | 4:17,400,093-17,405,282 | + | C2H4g18122 | CX4g034889 | LOC_Os04g33210 | Os04g0405000 | - | Detail |
| C1H4g26027 | 4:17,406,061-17,408,732 | - | C2H4g07819 | CX4g033742 | LOC_Os04g33220 | Os04g0405100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019842 | 2:31,960,605-31,969,143 | + | C1H2g03514 | C2H2g29121 | LOC_Os02g57120 | Os02g0816300 | - | Detail |
| CX2g021019 | 2:31,972,758-31,975,977 | + | C1H2g22705 | C2H2g15969 | LOC_Os02g57140 | Os02g0816400 | - | Detail |
| CX2g020615 | 2:31,983,333-31,984,874 | + | C1H2g08028 | C2H2g14831 | LOC_Os02g57150 | Os02g0816500 | - | Detail |
| CX2g024238 | 2:31,985,523-31,989,668 | - | C1H2g13297 | C2H2g13853 | LOC_Os02g57160 | Os02g0816600 | - | Detail |
| CX2g021688 | 2:31,990,741-31,992,472 | - | C1H2g29075 | C2H2g04727 | LOC_Os02g57170 | Os02g0816700 | - | Detail |
| CX2g019354 | 2:31,992,779-31,996,474 | + | C1H2g16275 | C2H2g17597 | LOC_Os02g57180 | Os02g0816800 | OsNDUFA9, FLO13 | Detail |
| CX2g021988 | 2:32,018,243-32,030,720 | + | C1H2g06133 | C2H2g26727 | LOC_Os02g57190 | Os02g0816900 | OSMYOXIB | Detail |
| CX2g019948 | 2:32,031,727-32,036,732 | + | C1H2g05881 | C2H2g04285 | LOC_Os02g57200 | Os02g0817000 | - | Detail |
| CX2g024220 | 2:32,041,672-32,043,088 | + | C1H2g01056 | C2H2g10819 | LOC_Os02g57210 | - | - | Detail |
| CX2g021541 | 2:32,044,610-32,044,762 | + | - | - | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| CX2g024286 | 2:32,045,598-32,050,706 | - | C1H2g12935 | C2H2g05620 | LOC_Os02g57220 | Os02g0817200 | - | Detail |
| CX2g021309 | 2:32,053,037-32,057,087 | + | C1H2g30239 | C2H2g26600 | LOC_Os02g57240 | Os02g0817500 | - | Detail |
| CX2g020596 | 2:32,058,724-32,060,416 | - | C1H2g30753 | C2H2g18662 | LOC_Os02g57250 | Os02g0817600 | - | Detail |
| CX2g019038 | 2:32,065,738-32,069,053 | - | C1H2g06843 | C2H2g25584 | LOC_Os02g57260 | Os02g0817700 | - | Detail |
| CX2g019127 | 2:32,070,266-32,073,597 | - | C1H2g21810 | C2H2g16029 | LOC_Os02g57270 | Os02g0817800 | RTBP1, rtbp1, TBP1, OsTBP1 | Detail |
| CX2g021653 | 2:32,075,530-32,076,226 | - | - | - | - | - | - | Detail |
| CX2g024084 | 2:32,076,310-32,077,454 | + | C1H2g00976 | C2H2g17783 | LOC_Os02g57280 | Os02g0818000 | OsCBSX3 | Detail |
| CX2g022651 | 2:32,078,105-32,083,341 | - | C1H2g14875 | C2H2g09230 | LOC_Os02g57290 | Os02g0817900 | - | Detail |
| CX2g022656 | 2:32,089,948-32,090,106 | + | - | - | - | Os09g0341901 | - | Detail |
| CX2g023430 | 2:32,091,328-32,097,826 | - | C1H2g16141 | C2H2g21254 | LOC_Os02g57310 | Os02g0818450 | - | Detail |