| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H10g16272 | 10:3,248,269-3,277,148 | + | C2H10g20181 | CX10g008109 | LOC_Os10g06610 | Os10g0154600 | - | Detail |
| C1H10g24162 | 10:3,286,056-3,286,601 | + | C2H10g02422 | CX10g008874 | LOC_Os10g06630 | Os10g0154700 | - | Detail |
| C1H10g24293 | 10:3,298,923-3,299,405 | + | C2H10g02422 | CX10g010116 | LOC_Os10g06640 | Os10g0154900 | - | Detail |
| C1H10g11933 | 10:3,303,826-3,304,947 | + | C2H10g10902 | CX10g008705 | LOC_Os10g06680 | Os10g0155100 | GAPLESS1 | Detail |
| C1H10g29185 | 10:3,305,496-3,305,840 | - | C2H10g15290 | CX10g009811 | LOC_Os10g06690 | Os10g0155200 | - | Detail |
| C1H10g24222 | 10:3,308,984-3,309,973 | + | C2H10g22482 | CX10g010517 | LOC_Os10g06700 | Os10g0155300 | - | Detail |
| C1H10g08786 | 10:3,313,669-3,316,742 | + | C2H10g08695 | CX10g009405 | LOC_Os10g06710 | Os10g0155400 | - | Detail |
| C1H10g04734 | 10:3,317,070-3,319,679 | - | C2H10g15728 | CX10g009125 | LOC_Os10g06720 | Os10g0155500 | - | Detail |
| C1H10g30755 | 10:3,337,502-3,341,203 | + | C2H10g21044 | CX10g007813 | LOC_Os10g06740 | Os10g0155700 | - | Detail |
| C1H10g08640 | 10:3,344,872-3,348,354 | + | C2H10g20792 | CX10g010501 | LOC_Os10g06760 | Os10g0155800 | - | Detail |
| C1H10g29778 | 10:3,360,524-3,361,516 | - | C2H10g06371 | CX10g010233 | LOC_Os10g06770 | Os10g0157200 | - | Detail |
| C1H10g22998 | 10:3,361,899-3,362,882 | + | C2H10g27893 | CX10g007975 | LOC_Os10g06950 | Os10g0156200 | - | Detail |
| C1H10g14111 | 10:3,380,970-3,381,840 | + | C2H10g00733 | CX10g007397 | - | Os10g0411100 | - | Detail |
| C1H10g31509 | 10:3,384,529-3,385,203 | + | - | CX10g008517 | - | - | - | Detail |
| C1H10g23831 | 10:3,385,643-3,388,025 | + | C2H10g23459 | CX10g008431 | LOC_Os10g06930 | Os10g0157200 | - | Detail |
| C1H10g13968 | 10:3,392,489-3,392,716 | + | C2H10g07388 | CX10g007546 | LOC_Os10g06939 | Os10g0157300 | - | Detail |
| C1H10g14079 | 10:3,395,545-3,396,504 | - | C2H10g27893 | CX10g007975 | LOC_Os10g06800 | Os10g0156200 | - | Detail |
| C1H10g14027 | 10:3,405,168-3,406,048 | - | C2H10g27880 | - | - | - | - | Detail |
| C1H10g25787 | 10:3,457,922-3,459,235 | - | - | - | - | - | - | Detail |
| C1H10g14652 | 10:3,461,349-3,464,758 | - | C2H4g28789 | CX10g009945 | LOC_Os04g04390 | Os10g0197600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019842 | 2:31,960,605-31,969,143 | + | C1H2g03514 | C2H2g29121 | LOC_Os02g57120 | Os02g0816300 | - | Detail |
| CX2g021019 | 2:31,972,758-31,975,977 | + | C1H2g22705 | C2H2g15969 | LOC_Os02g57140 | Os02g0816400 | - | Detail |
| CX2g020615 | 2:31,983,333-31,984,874 | + | C1H2g08028 | C2H2g14831 | LOC_Os02g57150 | Os02g0816500 | - | Detail |
| CX2g024238 | 2:31,985,523-31,989,668 | - | C1H2g13297 | C2H2g13853 | LOC_Os02g57160 | Os02g0816600 | - | Detail |
| CX2g021688 | 2:31,990,741-31,992,472 | - | C1H2g29075 | C2H2g04727 | LOC_Os02g57170 | Os02g0816700 | - | Detail |
| CX2g019354 | 2:31,992,779-31,996,474 | + | C1H2g16275 | C2H2g17597 | LOC_Os02g57180 | Os02g0816800 | OsNDUFA9, FLO13 | Detail |
| CX2g021988 | 2:32,018,243-32,030,720 | + | C1H2g06133 | C2H2g26727 | LOC_Os02g57190 | Os02g0816900 | OSMYOXIB | Detail |
| CX2g019948 | 2:32,031,727-32,036,732 | + | C1H2g05881 | C2H2g04285 | LOC_Os02g57200 | Os02g0817000 | - | Detail |
| CX2g024220 | 2:32,041,672-32,043,088 | + | C1H2g01056 | C2H2g10819 | LOC_Os02g57210 | - | - | Detail |
| CX2g021541 | 2:32,044,610-32,044,762 | + | - | - | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| CX2g024286 | 2:32,045,598-32,050,706 | - | C1H2g12935 | C2H2g05620 | LOC_Os02g57220 | Os02g0817200 | - | Detail |
| CX2g021309 | 2:32,053,037-32,057,087 | + | C1H2g30239 | C2H2g26600 | LOC_Os02g57240 | Os02g0817500 | - | Detail |
| CX2g020596 | 2:32,058,724-32,060,416 | - | C1H2g30753 | C2H2g18662 | LOC_Os02g57250 | Os02g0817600 | - | Detail |
| CX2g019038 | 2:32,065,738-32,069,053 | - | C1H2g06843 | C2H2g25584 | LOC_Os02g57260 | Os02g0817700 | - | Detail |
| CX2g019127 | 2:32,070,266-32,073,597 | - | C1H2g21810 | C2H2g16029 | LOC_Os02g57270 | Os02g0817800 | RTBP1, rtbp1, TBP1, OsTBP1 | Detail |
| CX2g021653 | 2:32,075,530-32,076,226 | - | - | - | - | - | - | Detail |
| CX2g024084 | 2:32,076,310-32,077,454 | + | C1H2g00976 | C2H2g17783 | LOC_Os02g57280 | Os02g0818000 | OsCBSX3 | Detail |
| CX2g022651 | 2:32,078,105-32,083,341 | - | C1H2g14875 | C2H2g09230 | LOC_Os02g57290 | Os02g0817900 | - | Detail |
| CX2g022656 | 2:32,089,948-32,090,106 | + | - | - | - | Os09g0341901 | - | Detail |
| CX2g023430 | 2:32,091,328-32,097,826 | - | C1H2g16141 | C2H2g21254 | LOC_Os02g57310 | Os02g0818450 | - | Detail |