| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24320 | 1:27,562,832-27,568,060 | - | C2H1g29572 | CX1g000235 | LOC_Os01g53680 | Os01g0738800 | - | Detail |
| C1H1g12855 | 1:27,570,268-27,575,965 | - | C2H1g23624 | CX1g004470 | LOC_Os01g53700 | Os01g0739000 | - | Detail |
| C1H1g24492 | 1:27,582,823-27,590,553 | + | C2H1g10920 | CX1g005768 | LOC_Os01g53710 | Os01g0739200 | - | Detail |
| C1H1g03337 | 1:27,592,155-27,598,910 | + | C2H1g15871 | CX1g005163 | LOC_Os01g53720 | Os01g0739400 | - | Detail |
| C1H1g05863 | 1:27,599,118-27,599,744 | - | C2H1g19412 | CX1g004558 | LOC_Os01g53730 | Os01g0739500 | - | Detail |
| C1H1g02213 | 1:27,612,406-27,615,765 | + | C2H1g01037 | CX1g002993 | LOC_Os01g53750 | Os01g0739700 | - | Detail |
| C1H1g17974 | 1:27,622,570-27,624,339 | + | C2H1g07224 | CX1g004055 | LOC_Os01g53790 | - | - | Detail |
| C1H1g15341 | 1:27,626,007-27,626,669 | + | C2H1g15894 | CX1g004055 | LOC_Os01g53790 | Os01g0740400 | - | Detail |
| C1H1g11923 | 1:27,628,320-27,633,452 | - | C2H1g04268 | CX1g000355 | LOC_Os01g53800 | Os01g0740500 | - | Detail |
| C1H1g10172 | 1:27,634,930-27,639,007 | - | C2H1g07977 | CX1g002299 | LOC_Os01g53810 | Os01g0740600 | - | Detail |
| C1H1g11507 | 1:27,642,852-27,647,621 | - | C2H1g07420 | CX1g002753 | LOC_Os01g53840 | Os01g0741200 | - | Detail |
| C1H1g08023 | 1:27,653,778-27,655,968 | + | C2H1g21659 | - | - | - | - | Detail |
| C1H1g07113 | 1:27,662,880-27,666,026 | + | C2H1g06484 | CX1g006967 | LOC_Os01g53880 | Os01g0741900 | IAA6, OsIAA6 | Detail |
| C1H1g30211 | 1:27,699,562-27,703,241 | + | C2H1g04401 | CX1g007266 | LOC_Os01g53920 | Os01g0742400 | OsASLRK | Detail |
| C1H1g16829 | 1:27,703,227-27,707,506 | - | C2H1g05690 | CX1g000337 | LOC_Os01g53930 | Os01g0742500 | OsHXK6 | Detail |
| C1H1g31036 | 1:27,709,451-27,711,043 | - | C2H1g15551 | CX1g005919 | LOC_Os01g53940 | Os01g0742766 | - | Detail |
| C1H1g12146 | 1:27,725,035-27,727,146 | + | C2H1g26459 | CX1g007218 | LOC_Os01g53980 | Os01g0743100 | - | Detail |
| C1H1g13979 | 1:27,733,408-27,736,064 | - | C2H1g30365 | CX1g003238 | LOC_Os01g53990 | Os01g0743200 | - | Detail |
| C1H1g20416 | 1:27,743,149-27,747,851 | + | C2H1g07295 | CX1g000573 | LOC_Os01g54010 | Os01g0743300 | - | Detail |
| C1H1g03969 | 1:27,747,960-27,754,344 | - | C2H1g18249 | CX1g001592 | LOC_Os01g54020 | Os01g0743400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX2g019842 | 2:31,960,605-31,969,143 | + | C1H2g03514 | C2H2g29121 | LOC_Os02g57120 | Os02g0816300 | - | Detail |
| CX2g021019 | 2:31,972,758-31,975,977 | + | C1H2g22705 | C2H2g15969 | LOC_Os02g57140 | Os02g0816400 | - | Detail |
| CX2g020615 | 2:31,983,333-31,984,874 | + | C1H2g08028 | C2H2g14831 | LOC_Os02g57150 | Os02g0816500 | - | Detail |
| CX2g024238 | 2:31,985,523-31,989,668 | - | C1H2g13297 | C2H2g13853 | LOC_Os02g57160 | Os02g0816600 | - | Detail |
| CX2g021688 | 2:31,990,741-31,992,472 | - | C1H2g29075 | C2H2g04727 | LOC_Os02g57170 | Os02g0816700 | - | Detail |
| CX2g019354 | 2:31,992,779-31,996,474 | + | C1H2g16275 | C2H2g17597 | LOC_Os02g57180 | Os02g0816800 | OsNDUFA9, FLO13 | Detail |
| CX2g021988 | 2:32,018,243-32,030,720 | + | C1H2g06133 | C2H2g26727 | LOC_Os02g57190 | Os02g0816900 | OSMYOXIB | Detail |
| CX2g019948 | 2:32,031,727-32,036,732 | + | C1H2g05881 | C2H2g04285 | LOC_Os02g57200 | Os02g0817000 | - | Detail |
| CX2g024220 | 2:32,041,672-32,043,088 | + | C1H2g01056 | C2H2g10819 | LOC_Os02g57210 | - | - | Detail |
| CX2g021541 | 2:32,044,610-32,044,762 | + | - | - | LOC_Os02g38690 | Os02g0599151 | - | Detail |
| CX2g024286 | 2:32,045,598-32,050,706 | - | C1H2g12935 | C2H2g05620 | LOC_Os02g57220 | Os02g0817200 | - | Detail |
| CX2g021309 | 2:32,053,037-32,057,087 | + | C1H2g30239 | C2H2g26600 | LOC_Os02g57240 | Os02g0817500 | - | Detail |
| CX2g020596 | 2:32,058,724-32,060,416 | - | C1H2g30753 | C2H2g18662 | LOC_Os02g57250 | Os02g0817600 | - | Detail |
| CX2g019038 | 2:32,065,738-32,069,053 | - | C1H2g06843 | C2H2g25584 | LOC_Os02g57260 | Os02g0817700 | - | Detail |
| CX2g019127 | 2:32,070,266-32,073,597 | - | C1H2g21810 | C2H2g16029 | LOC_Os02g57270 | Os02g0817800 | RTBP1, rtbp1, TBP1, OsTBP1 | Detail |
| CX2g021653 | 2:32,075,530-32,076,226 | - | - | - | - | - | - | Detail |
| CX2g024084 | 2:32,076,310-32,077,454 | + | C1H2g00976 | C2H2g17783 | LOC_Os02g57280 | Os02g0818000 | OsCBSX3 | Detail |
| CX2g022651 | 2:32,078,105-32,083,341 | - | C1H2g14875 | C2H2g09230 | LOC_Os02g57290 | Os02g0817900 | - | Detail |
| CX2g022656 | 2:32,089,948-32,090,106 | + | - | - | - | Os09g0341901 | - | Detail |
| CX2g023430 | 2:32,091,328-32,097,826 | - | C1H2g16141 | C2H2g21254 | LOC_Os02g57310 | Os02g0818450 | - | Detail |